RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 LAMB1P07942 1786 aa9.11□□□□□ -0.95
SPTA1-208ENST00000492934 ZMYND10O75800 440 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 FKBP1AP62942 108 aaKnown RBP9.1□□□□□ -0.95
SPTA1-208ENST00000492934 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 MFSD14BQ5SR56 506 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
SPTA1-208ENST00000492934 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 R3HDMLQ9H3Y0 253 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
SPTA1-208ENST00000492934 IGF2BP3O00425 579 aaKnown RBP eCLIP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 TERTO14746 1132 aaKnown RBP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 ALDH1L1O75891 902 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 GYG1P46976 350 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 GCGRP47871 477 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 TNFAIP1Q13829 316 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 RASA3Q14644 834 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 NBPF12Q5TAG4 269 aaPredicted RBP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 NLRP7Q8WX94 980 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 SUCLG2Q96I99 432 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 PRMT6Q96LA8 375 aaPredicted RBP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 TTF2Q9UNY4 1162 aaKnown RBP9.09□□□□□ -0.95
SPTA1-208ENST00000492934 TRIM17Q9Y577 477 aa9.09□□□□□ -0.95
SPTA1-208ENST00000492934 FAM205AQ6ZU69 1335 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 PDE4DIPQ5VU43 2346 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 HIBADHP31937 336 aaKnown RBP9.08□□□□□ -0.96
SPTA1-208ENST00000492934 CLCN1P35523 988 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 GJA5P36382 358 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 INHBEP58166 350 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 UBE4AQ14139 1066 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 PUS10Q3MIT2 529 aaKnown RBP9.08□□□□□ -0.96
SPTA1-208ENST00000492934 LCE2CQ5TA81 110 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 ELP3Q9H9T3 547 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 SERPINA10Q9UK55 444 aa9.08□□□□□ -0.96
SPTA1-208ENST00000492934 FCF1Q9Y324 198 aaKnown RBP9.08□□□□□ -0.96
SPTA1-208ENST00000492934 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 CHAF1AQ13111 956 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 CRHR2Q13324 411 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 OTUD7BQ6GQQ9 843 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 OTOP1Q7RTM1 612 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 FAM9BQ8IZU0 186 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 TDRD7Q8NHU6 1098 aaKnown RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 CD99L2Q8TCZ2 262 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 OPTNQ96CV9 577 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 ERO1AQ96HE7 468 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 PUS3Q9BZE2 481 aaKnown RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 TDRD3Q9H7E2 651 aaKnown RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
SPTA1-208ENST00000492934 ZNF70Q9UC06 446 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 IQSEC3Q9UPP2 1182 aaPredicted RBP9.07□□□□□ -0.96
SPTA1-208ENST00000492934 MROH5Q6ZUA9 1318 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 LOC100996750A0A140TA64 210 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 TTC24A2A3L6 582 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 FAM181BA6NEQ2 426 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 TCP10L2B9ZVM9 353 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 FRAT2O75474 233 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 USP2O75604 605 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 CRKP46108 304 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 TNNI2P48788 182 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 METTL24Q5JXM2 366 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 DZIP1LQ8IYY4 767 aaKnown RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 FAM84BQ96KN1 310 aaPredicted RBP9.06□□□□□ -0.96
SPTA1-208ENST00000492934 KRTAP4-6Q9BYQ5 205 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 TMEM39BQ9GZU3 492 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 GPCPD1Q9NPB8 672 aa9.06□□□□□ -0.96
SPTA1-208ENST00000492934 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
SPTA1-208ENST00000492934 CD46P15529 392 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 CACNB3P54284 484 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 VGLL4Q14135 290 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 GRIK5Q16478 980 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 KAZALD1Q96I82 304 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 TMOD2Q9NZR1 351 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 CSADQ9Y600 493 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 UTYO14607 1347 aa9.05□□□□□ -0.96
SPTA1-208ENST00000492934 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
SPTA1-208ENST00000492934 CCL15-CCL14A0A0B4J2E2 113 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 SP3Q02447 781 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 FUT2Q10981 343 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-208ENST00000492934 CCL15Q16663 113 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 RABL6Q3YEC7 729 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-208ENST00000492934 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 CAVIN4Q5BKX8 364 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
SPTA1-208ENST00000492934 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPTA1-208ENST00000492934 TBC1D22AQ8WUA7 517 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 TEKT1Q969V4 418 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 TRIM47Q96LD4 638 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 PTPN18Q99952 460 aa9.04□□□□□ -0.96
SPTA1-208ENST00000492934 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms