RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TRIM75PA6NK02 468 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 CYP2C8P10632 490 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 BCRP11274 1271 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 CAP2P40123 477 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 RPAP2Q8IXW5 612 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-205ENST00000492851 ZNF280CQ8ND82 737 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 SMCR8Q8TEV9 937 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-205ENST00000492851 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-205ENST00000492851 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 DBNLQ9UJU6 430 aaKnown RBP15.21■□□□□ 0.03
COL6A1-205ENST00000492851 AGTPBP1Q9UPW5 1226 aa15.21■□□□□ 0.03
COL6A1-205ENST00000492851 HMMRO75330 724 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 SLC34A2O95436 690 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 ASNSP08243 561 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 CAPN2P17655 700 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 EN2P19622 333 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-205ENST00000492851 ZAP70P43403 619 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 NKX2-3Q8TAU0 364 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 TGFBRAP1Q8WUH2 860 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-205ENST00000492851 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
COL6A1-205ENST00000492851 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 OSBPP22059 807 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 GRK4P32298 578 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-205ENST00000492851 UBXN2AP68543 259 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 SPP2Q13103 211 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-205ENST00000492851 METTL16Q86W50 562 aaKnown RBP15.19■□□□□ 0.02
COL6A1-205ENST00000492851 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-205ENST00000492851 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
COL6A1-205ENST00000492851 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
COL6A1-205ENST00000492851 CYP7A1P22680 504 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 AACSQ86V21 672 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 CLASRPQ8N2M8 674 aaKnown RBP15.18■□□□□ 0.02
COL6A1-205ENST00000492851 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 WDR18Q9BV38 432 aa15.18■□□□□ 0.02
COL6A1-205ENST00000492851 FLT1P17948 1338 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 C19orf81C9J6K1 198 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 MAPKAPK5Q8IW41 473 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 COA7Q96BR5 231 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
COL6A1-205ENST00000492851 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-205ENST00000492851 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
COL6A1-205ENST00000492851 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 TNPO2O14787 897 aaKnown RBP15.16■□□□□ 0.02
COL6A1-205ENST00000492851 RAB11FIP3O75154 756 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 SLURP2P0DP57 97 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 CTGFP29279 349 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 USP5P45974 858 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 IRF5Q13568 498 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 TTC6Q86TZ1 520 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 RHPN1Q8TCX5 695 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 PXYLP1Q8TE99 480 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
COL6A1-205ENST00000492851 IFIT2P09913 472 aaKnown RBP15.15■□□□□ 0.02
COL6A1-205ENST00000492851 BACE1P56817 501 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 PRKCZQ05513 592 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 FAM110CQ1W6H9 321 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 ADGRA1Q86SQ6 560 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL6A1-205ENST00000492851 ZBTB40Q9NUA8 1239 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
COL6A1-205ENST00000492851 PALD1Q9ULE6 856 aa15.15■□□□□ 0.02
COL6A1-205ENST00000492851 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-205ENST00000492851 MYCP01106 439 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-205ENST00000492851 GJB1P08034 283 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 HMGCS2P54868 508 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 TREML2Q5T2D2 321 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 EHD4Q9H223 541 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
COL6A1-205ENST00000492851 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
COL6A1-205ENST00000492851 ADCY3O60266 1144 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-205ENST00000492851 GJA8P48165 433 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 FLT3LGP49771 235 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
COL6A1-205ENST00000492851 DOCK1Q14185 1865 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 CCDC84Q86UT8 332 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-205ENST00000492851 GTF3C2Q8WUA4 911 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-205ENST00000492851 RNF208Q9H0X6 261 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 COG6Q9Y2V7 657 aa15.13■□□□□ 0.01
COL6A1-205ENST00000492851 HTTP42858 3142 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 CCL5P13501 91 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 IRX3P78415 501 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-205ENST00000492851 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
COL6A1-205ENST00000492851 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms