RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
PRAME-213ENST00000492657 RIOK1Q9BRS2 568 aaKnown RBP14.87□□□□□ -0.03
PRAME-213ENST00000492657 GNL3LQ9NVN8 582 aaKnown RBP14.87□□□□□ -0.03
PRAME-213ENST00000492657 BAZ2BQ9UIF8 2168 aaKnown RBP14.87□□□□□ -0.03
PRAME-213ENST00000492657 BAZ2AQ9UIF9 1905 aaKnown RBP14.87□□□□□ -0.03
PRAME-213ENST00000492657 BCORQ6W2J9 1755 aa14.87□□□□□ -0.03
PRAME-213ENST00000492657 IFNAR1P17181 557 aa14.87□□□□□ -0.03
PRAME-213ENST00000492657 CACTINQ8WUQ7 758 aaKnown RBP14.87□□□□□ -0.03
PRAME-213ENST00000492657 TPM3P06753 285 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 SLC3A2P08195 630 aaKnown RBP14.86□□□□□ -0.03
PRAME-213ENST00000492657 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 CEP57L1Q8IYX8 460 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 COL5A3P25940 1745 aaPredicted RBP14.86□□□□□ -0.03
PRAME-213ENST00000492657 LAMB2P55268 1798 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
PRAME-213ENST00000492657 SPECC1Q5M775 1068 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 AEBP2Q6ZN18 517 aaPredicted RBP14.86□□□□□ -0.03
PRAME-213ENST00000492657 ZNF654Q8IZM8 581 aa14.86□□□□□ -0.03
PRAME-213ENST00000492657 hCG_1642624A0A1W2PR95 340 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 GNPATO15228 680 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 SART3Q15020 963 aaKnown RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 MTERF4Q7Z6M4 381 aaKnown RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 NBPF11Q86T75 865 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 ERICH2A1L162 156 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 NBPF5PQ86XG9 351 aaPredicted RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 CRACR2BQ8N4Y2 399 aaPredicted RBP14.85□□□□□ -0.03
PRAME-213ENST00000492657 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
PRAME-213ENST00000492657 TNKSO95271 1327 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SYKP43405 635 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 TOB1P50616 345 aaPredicted RBP14.84□□□□□ -0.03
PRAME-213ENST00000492657 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
PRAME-213ENST00000492657 NR5A1Q13285 461 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SLC10A5Q5PT55 438 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SARM1Q6SZW1 724 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.84□□□□□ -0.03
PRAME-213ENST00000492657 TXNRD3Q86VQ6 643 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
PRAME-213ENST00000492657 OXER1Q8TDS5 423 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SETDB2Q96T68 719 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 GRIN1Q05586 938 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SEC23AQ15436 765 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 FBXO33Q7Z6M2 555 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 RNF41Q9H4P4 317 aaPredicted RBP14.84□□□□□ -0.03
PRAME-213ENST00000492657 NARFQ9UHQ1 456 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 CACNA1SQ13698 1873 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 TIAM2Q8IVF5 1701 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 CNTNAP4Q9C0A0 1308 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 NOSTRINQ8IVI9 506 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
PRAME-213ENST00000492657 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 STK36Q9NRP7 1315 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 FILIP1Q7Z7B0 1213 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 ENAHQ8N8S7 591 aaPredicted RBP14.83□□□□□ -0.04
PRAME-213ENST00000492657 RPS6KA4O75676 772 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 MMP1P03956 469 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 MECOMQ03112 1051 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 PNOCQ13519 176 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 ZRSR1Q15695 479 aaKnown RBP14.83□□□□□ -0.04
PRAME-213ENST00000492657 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 ESR2Q92731 530 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 HPSEQ9Y251 543 aa14.83□□□□□ -0.04
PRAME-213ENST00000492657 A0A1B0GUL6 1792 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 USP17L21D6R901 530 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 PPP6R2O75170 966 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 ZPR1O75312 459 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 PRDX5P30044 214 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 VPS72Q15906 364 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 NSUN4Q96CB9 384 aaKnown RBP14.82□□□□□ -0.04
PRAME-213ENST00000492657 MRFAP1L1Q96HT8 127 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 AATFQ9NY61 560 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■□□□□ 9.1
PRAME-213ENST00000492657 TOM1O60784 492 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 CYP2D6P10635 497 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 CDC25BP30305 580 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 NLRP12P59046 1061 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 LONRF3Q496Y0 759 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 CTR9Q6PD62 1173 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 NAT10Q9H0A0 1025 aaKnown RBP14.82□□□□□ -0.04
PRAME-213ENST00000492657 ANAPC4Q9UJX5 808 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 MYH13Q9UKX3 1938 aa14.82□□□□□ -0.04
PRAME-213ENST00000492657 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 FOXN1O15353 648 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 NMT2O60551 498 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 HIBADHP31937 336 aaKnown RBP14.81□□□□□ -0.04
PRAME-213ENST00000492657 RESP18Q5W5W9 173 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 TMTC2Q8N394 836 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 RGS22Q8NE09 1264 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 WASF1Q92558 559 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 ARHGEF1Q92888 912 aaKnown RBP14.81□□□□□ -0.04
PRAME-213ENST00000492657 CCNL1Q9UK58 526 aaPredicted RBP14.81□□□□□ -0.04
PRAME-213ENST00000492657 PCDHB6Q9Y5E3 794 aa14.81□□□□□ -0.04
PRAME-213ENST00000492657 PLEKHA8P1O95397 391 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms