RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 MCOLN1Q9GZU1 580 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 PUS7LQ9H0K6 701 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 DHX36Q9H2U1 1008 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 ARMT1Q9H993 441 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 PI4KBQ9UBF8 816 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 STAP2Q9UGK3 403 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 SAP30BPQ9UHR5 308 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 TTC41PQ6P2S7 1318 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 MAST2Q6P0Q8 1798 aa8.71□□□□□ -1.02
PDLIM1-204ENST00000492511 OTOFQ9HC10 1997 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 PRKAB2O43741 272 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 CTNND1O60716 968 aaKnown RBP8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 PTPRAP18433 802 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 MX1P20591 662 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 USP5P45974 858 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 PLCD1P51178 756 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 GTF2A2P52657 109 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 PDE1AP54750 535 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 NUCB1Q02818 461 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 DGKZQ13574 1117 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 SHROOM1Q2M3G4 852 aaPredicted RBP8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 SLC4A8Q2Y0W8 1093 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 CCDC84Q86UT8 332 aaPredicted RBP8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 CERS3Q8IU89 383 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 FOXP4Q8IVH2 680 aaPredicted RBP8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 SCYL3Q8IZE3 742 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 KBTBD3Q8NAB2 608 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 SDR42E1Q8WUS8 393 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 OSBP2Q969R2 916 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 LNPKQ9C0E8 428 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 AFG3L2Q9Y4W6 797 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 DOCK2Q92608 1830 aa8.7□□□□□ -1.02
PDLIM1-204ENST00000492511 CCL15-CCL14A0A0B4J2E2 113 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 BTBD19C9JJ37 291 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 SMIM22K7EJ46 135 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 GLRX3O76003 335 aaKnown RBP8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 MBD4O95243 580 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 CAP2P40123 477 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 CCL15Q16663 113 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 FAM43AQ8N2R8 423 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 DCP1AQ9NPI6 582 aaPredicted RBP8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 HERC5Q9UII4 1024 aaKnown RBP8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
PDLIM1-204ENST00000492511 GPR25O00155 361 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CXCL11O14625 94 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 ERC2O15083 957 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 RNF113AO15541 343 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CYP2D6P10635 497 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CETPP11597 493 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CAP1Q01518 475 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 GABPAQ06546 454 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CRHR2Q13324 411 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 SNAPC2Q13487 334 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 ZSCAN25Q6NSZ9 544 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 GPAT2Q6NUI2 795 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 TATDN1Q6P1N9 297 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CHD1LQ86WJ1 897 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 ZNF296Q8WUU4 475 aaPredicted RBP8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 STRBPQ96SI9 672 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-204ENST00000492511 A0A0G2JLL6 359 aaPredicted RBP8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 M0R2C6 588 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 SIPA1L1O43166 1804 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 PDE4AP27815 886 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 SHMT1P34896 483 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 HTTP42858 3142 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 NOM1Q5C9Z4 860 aaKnown RBP8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 PRRT2Q7Z6L0 340 aaPredicted RBP8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 APPBP2Q92624 585 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 EHD4Q9H223 541 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 PICK1Q9NRD5 415 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
PDLIM1-204ENST00000492511 TNRC18O15417 2968 aaPredicted RBP8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 CYP2D7A0A087X1C5 515 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 GSG1L2A8MUP6 293 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 GDF11O95390 407 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 POLR3DP05423 398 aaPredicted RBP8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 HLA-DOAP06340 250 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 GUCY1A2P33402 732 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 ZMYM1Q5SVZ6 1142 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 OTUD7BQ6GQQ9 843 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 CTR9Q6PD62 1173 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 ANKRD23Q86SG2 305 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 CRACR2BQ8N4Y2 399 aaPredicted RBP8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
PDLIM1-204ENST00000492511 OSBPL3Q9H4L5 887 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms