RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 TBC1D12O60347 775 aa17.9■□□□□ 0.46
SS18L1-205ENST00000492466 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
SS18L1-205ENST00000492466 OSBPP22059 807 aa17.9■□□□□ 0.46
SS18L1-205ENST00000492466 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
SS18L1-205ENST00000492466 TLR7Q9NYK1 1049 aaKnown RBP17.9■□□□□ 0.46
SS18L1-205ENST00000492466 SRRDQ9UH36 339 aa17.9■□□□□ 0.46
SS18L1-205ENST00000492466 MYO5AQ9Y4I1 1855 aaKnown RBP17.9■□□□□ 0.46
SS18L1-205ENST00000492466 SZT2Q5T011 3432 aa17.89■□□□□ 0.46
SS18L1-205ENST00000492466 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
SS18L1-205ENST00000492466 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
SS18L1-205ENST00000492466 PICK1Q9NRD5 415 aa17.89■□□□□ 0.45
SS18L1-205ENST00000492466 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
SS18L1-205ENST00000492466 RAI14Q9P0K7 980 aa17.89■□□□□ 0.45
SS18L1-205ENST00000492466 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
SS18L1-205ENST00000492466 DBNLQ9UJU6 430 aaKnown RBP17.89■□□□□ 0.45
SS18L1-205ENST00000492466 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
SS18L1-205ENST00000492466 DOCK1Q14185 1865 aa17.88■□□□□ 0.45
SS18L1-205ENST00000492466 MAP4K4O95819 1239 aaPredicted RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 RRP1BQ14684 758 aaKnown RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 MTFR1Q15390 333 aa17.88■□□□□ 0.45
SS18L1-205ENST00000492466 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 CCDC84Q86UT8 332 aaPredicted RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 LRRCC1Q9C099 1032 aa17.88■□□□□ 0.45
SS18L1-205ENST00000492466 LRP2BPQ9P2M1 347 aa17.88■□□□□ 0.45
SS18L1-205ENST00000492466 COL2A1P02458 1487 aaPredicted RBP17.88■□□□□ 0.45
SS18L1-205ENST00000492466 FAM196BA6NMK8 535 aa17.87■□□□□ 0.45
SS18L1-205ENST00000492466 LDHCP07864 332 aa17.87■□□□□ 0.45
SS18L1-205ENST00000492466 SLC4A8Q2Y0W8 1093 aa17.87■□□□□ 0.45
SS18L1-205ENST00000492466 SLC45A1Q9Y2W3 748 aa17.87■□□□□ 0.45
SS18L1-205ENST00000492466 CEP290O15078 2479 aa17.87■□□□□ 0.45
SS18L1-205ENST00000492466 FMNL1O95466 1100 aaPredicted RBP17.86■□□□□ 0.45
SS18L1-205ENST00000492466 GSTO1P78417 241 aa17.86■□□□□ 0.45
SS18L1-205ENST00000492466 SHISA4Q96DD7 197 aa17.86■□□□□ 0.45
SS18L1-205ENST00000492466 NOL10Q9BSC4 688 aaKnown RBP17.86■□□□□ 0.45
SS18L1-205ENST00000492466 OSBPL5Q9H0X9 879 aaPredicted RBP17.86■□□□□ 0.45
SS18L1-205ENST00000492466 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 MGAMO43451 1857 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 HOXD10P28358 340 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 GRK4P32298 578 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 PRKCZQ05513 592 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 ADGRA1Q86SQ6 560 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 MYPNQ86TC9 1320 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 SH3RF3Q8TEJ3 882 aaPredicted RBP17.85■□□□□ 0.45
SS18L1-205ENST00000492466 GABRQQ9UN88 632 aa17.85■□□□□ 0.45
SS18L1-205ENST00000492466 CYP2E1P05181 493 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-205ENST00000492466 TREML2Q5T2D2 321 aa17.84■□□□□ 0.45
SS18L1-205ENST00000492466 GPATCH3Q96I76 525 aa17.84■□□□□ 0.45
SS18L1-205ENST00000492466 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-205ENST00000492466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.84■□□□□ 0.453e-9■■■■□ 25.5
SS18L1-205ENST00000492466 MYH7P12883 1935 aa17.84■□□□□ 0.45
SS18L1-205ENST00000492466 SIPA1L1O43166 1804 aa17.84■□□□□ 0.45
SS18L1-205ENST00000492466 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
SS18L1-205ENST00000492466 CAP2P40123 477 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 ZAP70P43403 619 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 FCGRTP55899 365 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 PPP4CP60510 307 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 TEX11Q8IYF3 940 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 RAET1EQ8TD07 263 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
SS18L1-205ENST00000492466 PCDH10Q9P2E7 1040 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 AGTPBP1Q9UPW5 1226 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
SS18L1-205ENST00000492466 IRX6P78412 446 aaPredicted RBP17.82■□□□□ 0.44
SS18L1-205ENST00000492466 SPP2Q13103 211 aa17.82■□□□□ 0.44
SS18L1-205ENST00000492466 AAMPQ13685 434 aa17.82■□□□□ 0.44
SS18L1-205ENST00000492466 HABP4Q5JVS0 413 aaKnown RBP17.82■□□□□ 0.44
SS18L1-205ENST00000492466 UBE2Q1Q7Z7E8 422 aa17.82■□□□□ 0.44
SS18L1-205ENST00000492466 AATFQ9NY61 560 aaKnown RBP eCLIP17.82■□□□□ 0.44
SS18L1-205ENST00000492466 DOCK3Q8IZD9 2030 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 IDH1O75874 414 aaKnown RBP17.81■□□□□ 0.44
SS18L1-205ENST00000492466 JAG1P78504 1218 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 NAA16Q6N069 864 aaPredicted RBP17.81■□□□□ 0.44
SS18L1-205ENST00000492466 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
SS18L1-205ENST00000492466 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 EXOC6Q8TAG9 804 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 DNAJC18Q9H819 358 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 PIH1D3Q9NQM4 214 aaKnown RBP17.81■□□□□ 0.44
SS18L1-205ENST00000492466 CDK5RAP2Q96SN8 1893 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 ATAD5Q96QE3 1844 aa17.81■□□□□ 0.44
SS18L1-205ENST00000492466 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 GJB1P08034 283 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 CCL5P13501 91 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 GJA8P48165 433 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 FLT3LGP49771 235 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 PROCA1Q8NCQ7 364 aaPredicted RBP17.8■□□□□ 0.44
SS18L1-205ENST00000492466 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 PI4KBQ9UBF8 816 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 HERC5Q9UII4 1024 aaKnown RBP17.8■□□□□ 0.44
SS18L1-205ENST00000492466 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
SS18L1-205ENST00000492466 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
SS18L1-205ENST00000492466 SH3D19Q5HYK7 790 aa17.79■□□□□ 0.44
SS18L1-205ENST00000492466 ANKRD13CQ8N6S4 541 aa17.79■□□□□ 0.44
SS18L1-205ENST00000492466 SMCR8Q8TEV9 937 aaPredicted RBP17.79■□□□□ 0.44
SS18L1-205ENST00000492466 TGFBRAP1Q8WUH2 860 aa17.79■□□□□ 0.44
SS18L1-205ENST00000492466 NDUFB9Q9Y6M9 179 aa17.79■□□□□ 0.44
SS18L1-205ENST00000492466 FLT1P17948 1338 aa17.78■□□□□ 0.44
SS18L1-205ENST00000492466 FOCADQ5VW36 1801 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms