RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 IDI2Q9BXS1 227 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 HMX1Q9NP08 348 aaPredicted RBP13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
CLCNKA-206ENST00000491433 DOCK3Q8IZD9 2030 aa13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 GCLCP48506 637 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 SMAD3P84022 425 aaKnown RBP13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 NFIAQ12857 509 aa13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 ZSCAN29Q8IWY8 852 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
CLCNKA-206ENST00000491433 SALL1Q9NSC2 1324 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 SEMA3EO15041 775 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 MAP3K10Q02779 954 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 ANKRD13CQ8N6S4 541 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
CLCNKA-206ENST00000491433 PHIPQ8WWQ0 1821 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 PRDX5P30044 214 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 RGS3P49796 1198 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 ATRNL1Q5VV63 1379 aa13.9□□□□□ -0.18
CLCNKA-206ENST00000491433 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 EYA2O00167 538 aa13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 ZBTB22O15209 634 aa13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 TRMT44Q8IYL2 757 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 ANKRD44Q8N8A2 993 aa13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 DDX60LQ5H9U9 1706 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-206ENST00000491433 TBC1D12O60347 775 aa13.88□□□□□ -0.19
CLCNKA-206ENST00000491433 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
CLCNKA-206ENST00000491433 EPHX3Q9H6B9 360 aa13.88□□□□□ -0.19
CLCNKA-206ENST00000491433 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
CLCNKA-206ENST00000491433 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 ZFPM1Q8IX07 1006 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 PPM1EQ8WY54 764 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 CEP126Q9P2H0 1117 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 GAKO14976 1311 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 PTPRCP08575 1304 aa13.87□□□□□ -0.19
CLCNKA-206ENST00000491433 LOC285556D6RIA3 1793 aa13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 GPR37L1O60883 481 aa13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 MAP4K4O95819 1239 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 NECAB3Q96P71 396 aaPredicted RBP13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 AS3MTQ9HBK9 375 aa13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
CLCNKA-206ENST00000491433 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 CIAO1O76071 339 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 TREML2Q5T2D2 321 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 SOCS4Q8WXH5 440 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 HDAC5Q9UQL6 1122 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 PFASO15067 1338 aa13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
CLCNKA-206ENST00000491433 RFX7Q2KHR2 1363 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 DDTLA6NHG4 134 aaPredicted RBP13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 XRCC5P13010 732 aaKnown RBP13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 PICALMQ13492 652 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 PDE3AQ14432 1141 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 GRIN2CQ14957 1233 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 SHHQ15465 462 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 SH3BP5LQ7L8J4 393 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 MORF4L1Q9UBU8 362 aa13.84□□□□□ -0.19
CLCNKA-206ENST00000491433 ATAD5Q96QE3 1844 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 USP17L5A8MUK1 530 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 RFX5P48382 616 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 SPP2Q13103 211 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 SH3D19Q5HYK7 790 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 MAP3K21Q5TCX8 1036 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 ASCC2Q9H1I8 757 aaPredicted RBP13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
CLCNKA-206ENST00000491433 LDHCP07864 332 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 MAPK4P31152 587 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 BTDP43251 543 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 HMGCS2P54868 508 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 NHLH1Q02575 133 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 TRIB2Q92519 343 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 GAS2L1Q99501 681 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 TMOD4Q9NZQ9 345 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 ABCF2Q9UG63 623 aa13.82□□□□□ -0.2
CLCNKA-206ENST00000491433 PLXNB2O15031 1838 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms