RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ZSCAN29Q8IWY8 852 aaPredicted RBP10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 HMG20BQ9P0W2 317 aa10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 BIN2Q9UBW5 565 aaPredicted RBP10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.45□□□□□ -0.74
APOBEC3F-204ENST00000491387 SZT2Q5T011 3432 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 TNPO2O14787 897 aaKnown RBP10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 SRGAP3O43295 1099 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 INHAP05111 366 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 GCLCP48506 637 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 DIEXFQ68CQ4 756 aaKnown RBP10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 SPATA5Q8NB90 893 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 SMCR8Q8TEV9 937 aaPredicted RBP10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 MYH7P12883 1935 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 LOC285556D6RIA3 1793 aa10.44□□□□□ -0.74
APOBEC3F-204ENST00000491387 TRIM75PA6NK02 468 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 SLURP2P0DP57 97 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 ELNP15502 786 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 CAP2P40123 477 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 PICALMQ13492 652 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 TREML2Q5T2D2 321 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 METTL16Q86W50 562 aaKnown RBP10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 ANKRD13CQ8N6S4 541 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 ZNF280CQ8ND82 737 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 COA7Q96BR5 231 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 WDR18Q9BV38 432 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 GJD2Q9UKL4 321 aa10.43□□□□□ -0.74
APOBEC3F-204ENST00000491387 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 PPP4CP60510 307 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 SPP2Q13103 211 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 PABPC4Q13310 644 aaKnown RBP eCLIP10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 DEFB118Q96PH6 123 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 MORF4L1Q9UBU8 362 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 MYH1P12882 1939 aa10.42□□□□□ -0.74
APOBEC3F-204ENST00000491387 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 MYH8P13535 1937 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 IPO8O15397 1037 aaKnown RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 TFRCP02786 760 aaKnown RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 HMGCRP04035 888 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 HOXA7P31268 230 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 MCAMP43121 646 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 PI16Q6UXB8 463 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 CCDC84Q86UT8 332 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 ASCC2Q9H1I8 757 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 PI4KBQ9UBF8 816 aa10.41□□□□□ -0.74
APOBEC3F-204ENST00000491387 FAM196BA6NMK8 535 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 EVI5O60447 810 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 GNAI2P04899 355 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 TRIM27P14373 513 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 PLCG2P16885 1265 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 BMP8BP34820 402 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 HMGCS2P54868 508 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 BACE1P56817 501 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 TBC1D9Q6ZT07 1266 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 NECAB2Q7Z6G3 386 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 FOXP4Q8IVH2 680 aaPredicted RBP10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 NEUROD6Q96NK8 337 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 RAI14Q9P0K7 980 aa10.4□□□□□ -0.74
APOBEC3F-204ENST00000491387 RPTORQ8N122 1335 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 PNMA6EA0A0J9YXQ4 647 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 C19orf81C9J6K1 198 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 BAG3O95817 575 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 ASNSP08243 561 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 G3BP1Q13283 466 aaKnown RBP eCLIP10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 POLA2Q14181 598 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 GORABQ5T7V8 394 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 MAP3K21Q5TCX8 1036 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 ATF7IPQ6VMQ6 1270 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 TEX11Q8IYF3 940 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 FRAT1Q92837 279 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 PAWRQ96IZ0 340 aaKnown RBP10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 LRP2BPQ9P2M1 347 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 PLXNB2O15031 1838 aa10.39□□□□□ -0.75
APOBEC3F-204ENST00000491387 TMED8Q6PL24 325 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 SSH3Q8TE77 659 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 SH3RF3Q8TEJ3 882 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 USP6NLQ92738 828 aa10.38□□□□□ -0.75
APOBEC3F-204ENST00000491387 GDF15Q99988 308 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms