RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PRDM5Q9NQX1 630 aaPredicted RBP3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ADGRE2Q9UHX3 823 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 SYNGAP1Q96PV0 1343 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 ANKRD33BA6NCL7 494 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 FANCGO15287 622 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 TRIM37O94972 964 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 P4HBP07237 508 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 JUNBP17275 347 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 CYP7A1P22680 504 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 TNNI2P48788 182 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 PRKCQQ04759 706 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 ZNF792Q3KQV3 632 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 MPZL3Q6UWV2 235 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 CDH24Q86UP0 819 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 GATA6Q92908 595 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 FRMD6Q96NE9 622 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 MIPEPQ99797 713 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 MIR1-1HGQ9H1L0 117 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 PRDM7Q9NQW5 492 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 ZSWIM5Q9P217 1185 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 PPM1HQ9ULR3 514 aa3.04□□□□□ -1.92
SNRNP40-207ENST00000491106 RSF1Q96T23 1441 aaPredicted RBP3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 ENC1O14682 589 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 BPNT1O95861 308 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 PRNPP04156 253 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 CEACAM5P06731 702 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 NEFMP07197 916 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 CELA3AP09093 270 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 INPP5AQ14642 412 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 SFRP5Q5T4F7 317 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 SEZ6L2Q6UXD5 910 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 SV2BQ7L1I2 683 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 PDZD3Q86UT5 571 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 RELL1Q8IUW5 271 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 HID1Q8IV36 788 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 PLPPR2Q96GM1 343 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 DUSP9Q99956 384 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 KRTAP4-8Q9BYQ9 185 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 FOXQ1Q9C009 403 aa3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 GSX1Q9H4S2 264 aaPredicted RBP3.03□□□□□ -1.92
SNRNP40-207ENST00000491106 LRRC10BA6NIK2 292 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 MINDY4BA8MYZ0 360 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 F6X3S4 739 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 H3BS24 57 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 PRPF40AO75400 957 aaKnown RBP3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 LRIG2O94898 1065 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 PGRP06401 933 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 GNA15P30679 374 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 GRK4P32298 578 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 ITGAEP38570 1179 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 PDE4BQ07343 736 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 SEPT6Q14141 434 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 TAF1CQ15572 869 aaPredicted RBP3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 KCNMB1Q16558 191 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 WIPI1Q5MNZ9 446 aaPredicted RBP3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 ZBTB37Q5TC79 503 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 LRFN4Q6PJG9 635 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 ARMCX6Q7L4S7 300 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 MFSD2AQ8NA29 543 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 C3orf58Q8NDZ4 430 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM168AQ92567 244 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 UBE2FQ969M7 185 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 HSPA12BQ96MM6 686 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 TRAIPQ9BWF2 469 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 VTI1BQ9UEU0 232 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 PCDHB5Q9Y5E4 795 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 SNX11Q9Y5W9 270 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 SNCAIPQ9Y6H5 919 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 AK5Q9Y6K8 562 aa3.02□□□□□ -1.93
SNRNP40-207ENST00000491106 SSU72P8A0A1W2PR75 194 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 BTBD11A6QL63 1104 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 FARP2O94887 1054 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 IGHA2P01877 340 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 RNASE1P07998 156 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 RLBP1P12271 317 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 FUT4P22083 530 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 GBP2P32456 591 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 AFMP43652 599 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 OXCT1P55809 520 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 PTPN11Q06124 597 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 FMR1Q06787 632 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 ZNF252P-AS1Q0IIN9 211 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 MLANAQ16655 118 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 TSNAXIP1Q2TAA8 658 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 TMEM67Q5HYA8 995 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 ZNF648Q5T619 568 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 OGFOD2Q6N063 350 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 ZNF746Q6NUN9 644 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 LETMD1Q6P1Q0 360 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 SLC23A3Q6PIS1 610 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM9AQ8IZU1 332 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 HEXIM2Q96MH2 286 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM161BQ96MY7 647 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 DPH2Q9BQC3 489 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 WNT10AQ9GZT5 417 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 GZF1Q9H116 711 aaPredicted RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 CARS2Q9HA77 564 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 MKNK2Q9HBH9 465 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 PARP2Q9UGN5 583 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms