RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 HAND2P61296 217 aa22.1■■□□□ 1.13
SNAPC3-206ENST00000490969 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
SNAPC3-206ENST00000490969 CNNM3Q8NE01 707 aa22.1■■□□□ 1.13
SNAPC3-206ENST00000490969 PUF60Q9UHX1 559 aaKnown RBP22.1■■□□□ 1.13
SNAPC3-206ENST00000490969 CCDC175P0C221 793 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 MTF1Q14872 753 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 MSL3Q8N5Y2 521 aaKnown RBP22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 CLIC6Q96NY7 704 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 EIF3JO75822 258 aaKnown RBP22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 ZNF18P17022 549 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 CTR9Q6PD62 1173 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 VPS37DQ86XT2 251 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 CEP112Q8N8E3 955 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 MSANTD4Q8NCY6 345 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 PNKPQ96T60 521 aa22.09■■□□□ 1.13
SNAPC3-206ENST00000490969 ERLIN1O75477 346 aa22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 RPS6KA5O75582 802 aa22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 MB21D2Q8IYB1 491 aaPredicted RBP22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 CDCA7Q9BWT1 371 aaPredicted RBP22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 NFE2L3Q9Y4A8 694 aa22.08■■□□□ 1.13
SNAPC3-206ENST00000490969 A0A087WZG4 1122 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 GOLGA6L1Q8N7Z2 621 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 CDC23Q9UJX2 597 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 KCNH3Q9ULD8 1083 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 L1RE1Q9UN81 338 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 NUP188Q5SRE5 1749 aa22.08■■□□□ 1.12
SNAPC3-206ENST00000490969 EP400Q96L91 3159 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 N4BP1O75113 896 aaKnown RBP22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 IMMTQ16891 758 aaKnown RBP22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 RGS22Q8NE09 1264 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 AIFM3Q96NN9 605 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 MAP3K14Q99558 947 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 LZTFL1Q9NQ48 299 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 CASP7P55210 303 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 ANTXR2P58335 489 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 TIMM10P62072 90 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 NOM1Q5C9Z4 860 aaKnown RBP22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 CERS3Q8IU89 383 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 FNBP4Q8N3X1 1017 aaPredicted RBP22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 OSBP2Q969R2 916 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 RAI14Q9P0K7 980 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 ZBTB1Q9Y2K1 713 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 FAN1Q9Y2M0 1017 aa22.07■■□□□ 1.12
SNAPC3-206ENST00000490969 FOXN1O15353 648 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 IRX3P78415 501 aaPredicted RBP22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 FMR1Q06787 632 aaKnown RBP eCLIP22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 ALG1Q9BT22 464 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 ABCB6Q9NP58 842 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 SOWAHDA6NJG2 315 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 VPS72Q15906 364 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 FOXR1Q6PIV2 292 aa22.06■■□□□ 1.12
SNAPC3-206ENST00000490969 IFIT1P09914 478 aaKnown RBP22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 LMBR1LQ6UX01 489 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 ATG9AQ7Z3C6 839 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 SUGCTQ9HAC7 445 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 USP21Q9UK80 565 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 MAN1B1Q9UKM7 699 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 C4AP0C0L4 1744 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 C4BP0C0L5 1744 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 FOXP2O15409 715 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 KIF5CO60282 957 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 KRT40Q6A162 431 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 ENOX1Q8TC92 643 aaKnown RBP22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 ZBTB9Q96C00 473 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 ADGRG1Q9Y653 693 aa22.05■■□□□ 1.12
SNAPC3-206ENST00000490969 AKR1B15C9JRZ8 316 aaPredicted RBP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 MDM2Q00987 491 aaPredicted RBP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 PANX2Q96RD6 677 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 A0A1B0GUL7 405 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 MAGEA9P43362 315 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 KCNQ4P56696 695 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 HLFQ16534 295 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 TRMT44Q8IYL2 757 aaKnown RBP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 NCOA7Q8NI08 942 aa22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 DDX60Q8IY21 1712 aaKnown RBP22.04■■□□□ 1.12
SNAPC3-206ENST00000490969 STARD3NLO95772 234 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 TUBB4BP68371 445 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 NR1I3Q14994 352 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 WWC2Q6AWC2 1192 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 RAD9BQ6WBX8 426 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 RALYLQ86SE5 291 aaKnown RBP22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 ELOA2Q8IYF1 753 aaPredicted RBP22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 GPR108Q9NPR9 543 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 HOOK1Q9UJC3 728 aaKnown RBP22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 A0A0U1RQJ8 604 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 FGAP02671 866 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 TUBB2AQ13885 445 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 MLKLQ8NB16 471 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 ATRIPQ8WXE1 791 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 TUBB2BQ9BVA1 445 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 TEX13AQ9BXU3 409 aaPredicted RBP22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 TAOK2Q9UL54 1235 aa22.03■■□□□ 1.12
SNAPC3-206ENST00000490969 ICE2Q659A1 982 aa22.02■■□□□ 1.12
SNAPC3-206ENST00000490969 MKRN1Q9UHC7 482 aaKnown RBP22.02■■□□□ 1.12
SNAPC3-206ENST00000490969 DACH1Q9UI36 760 aa22.02■■□□□ 1.12
SNAPC3-206ENST00000490969 TJP1Q07157 1748 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms