RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 CTNND1O60716 968 aaKnown RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 SHMT1P34896 483 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 OSBP2Q969R2 916 aa11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 HERC5Q9UII4 1024 aaKnown RBP11.2□□□□□ -0.62
SUPT20H-220ENST00000490716 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 STRBPQ96SI9 672 aaKnown RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 DHX36Q9H2U1 1008 aaKnown RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 VEZTQ9HBM0 779 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 LDHCP07864 332 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 IREB2P48200 963 aaKnown RBP11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 INHBEP58166 350 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 SCYL3Q8IZE3 742 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 GINM1Q9NU53 330 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 PLCD1P51178 756 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 SBK1Q52WX2 424 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 ZMYM1Q5SVZ6 1142 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 ABCF2Q9UG63 623 aa11.19□□□□□ -0.62
SUPT20H-220ENST00000490716 ALPK3Q96L96 1907 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 CTGFP29279 349 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 CAP2P40123 477 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 GIMAP6Q6P9H5 292 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 ERO1BQ86YB8 467 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 M0R2C6 588 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 IRF6O14896 467 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 GOLIM4O00461 696 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 MX1P20591 662 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 TBC1D2Q9BYX2 928 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 BOLA2Q9H3K6 86 aa11.18□□□□□ -0.62
SUPT20H-220ENST00000490716 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 PLCG2P16885 1265 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 CTCFP49711 727 aaPredicted RBP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 HOOK2Q96ED9 719 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 RBM5P52756 815 aaKnown RBP eCLIP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 ANKRD23Q86SG2 305 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 C12orf42Q96LP6 360 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 ZNF408Q9H9D4 720 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 GSPT1P15170 499 aaKnown RBP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 PI4KBQ9UBF8 816 aa11.17□□□□□ -0.62
SUPT20H-220ENST00000490716 CYP7A1P22680 504 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 TCP10Q12799 353 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 IL25Q9H293 177 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 FRAT2O75474 233 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 MAP3K12Q12852 859 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 CTR9Q6PD62 1173 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 MIGA2Q7L4E1 593 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 FOXP4Q8IVH2 680 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 TGFBRAP1Q8WUH2 860 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 CXCL11O14625 94 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 PRKAB2O43741 272 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 DCAF15Q66K64 600 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 C17orf99Q6UX52 265 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 C16orf86Q6ZW13 317 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 ANAPC4Q9UJX5 808 aa11.16□□□□□ -0.62
SUPT20H-220ENST00000490716 NF2P35240 595 aa11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 TEX11Q8IYF3 940 aa11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 ATP8A2Q9NTI2 1148 aa11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 GLRX3O76003 335 aaKnown RBP11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 BCRP11274 1271 aa11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 LBX1P52954 281 aa11.15□□□□□ -0.62
SUPT20H-220ENST00000490716 BTBD19C9JJ37 291 aa11.15□□□□□ -0.63
SUPT20H-220ENST00000490716 GTF2A2P52657 109 aa11.15□□□□□ -0.63
SUPT20H-220ENST00000490716 LBX2Q6XYB7 198 aa11.15□□□□□ -0.63
SUPT20H-220ENST00000490716 APPBP2Q92624 585 aa11.15□□□□□ -0.63
SUPT20H-220ENST00000490716 PALD1Q9ULE6 856 aa11.15□□□□□ -0.63
SUPT20H-220ENST00000490716 DNAH12Q6ZR08 3092 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 BAG3O95817 575 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 ALX1Q15699 326 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 MAGEB6P1A0A0J9YX57 407 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 SREBF2Q12772 1141 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 HOXA7P31268 230 aaPredicted RBP11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 KIAA1755Q5JYT7 1200 aa11.14□□□□□ -0.63
SUPT20H-220ENST00000490716 MIGA1Q8NAN2 632 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms