RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 IL25Q9H293 177 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 CNNM2Q9H8M5 875 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 EPB41L4AQ9HCS5 686 aaPredicted RBP12.99□□□□□ -0.33
VARS2-210ENST00000490699 PI4KBQ9UBF8 816 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 SWAP70Q9UH65 585 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 PALD1Q9ULE6 856 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 BAZ2AQ9UIF9 1905 aaKnown RBP12.98□□□□□ -0.33
VARS2-210ENST00000490699 PSMA5P28066 241 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 HSPA4P34932 840 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 CLCN6P51797 869 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 HIRAP54198 1017 aaPredicted RBP12.98□□□□□ -0.33
VARS2-210ENST00000490699 CREB3L3Q68CJ9 461 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
VARS2-210ENST00000490699 EHD4Q9H223 541 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 MKNK2Q9HBH9 465 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 DDX4Q9NQI0 724 aaKnown RBP12.98□□□□□ -0.33
VARS2-210ENST00000490699 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
VARS2-210ENST00000490699 SERPINB13Q9UIV8 391 aa12.98□□□□□ -0.33
VARS2-210ENST00000490699 SLC27A2O14975 620 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 ANAPC15P60006 121 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 HAND2P61296 217 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 SLC4A8Q2Y0W8 1093 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 C12orf60Q5U649 245 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 KRT23Q9C075 422 aa12.97□□□□□ -0.33
VARS2-210ENST00000490699 SEC24BO95487 1268 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
VARS2-210ENST00000490699 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 ZNF444Q8N0Y2 327 aaPredicted RBP12.96□□□□□ -0.33
VARS2-210ENST00000490699 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 ESR2Q92731 530 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 TMEM39BQ9GZU3 492 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
VARS2-210ENST00000490699 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
VARS2-210ENST00000490699 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
VARS2-210ENST00000490699 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
VARS2-210ENST00000490699 CNTNAP1P78357 1384 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 ROBO3Q96MS0 1386 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 ASTN2O75129 1339 aaPredicted RBP12.95□□□□□ -0.34
VARS2-210ENST00000490699 POTECB2RU33 542 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 FOXP2O15409 715 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 PPP1R12BO60237 982 aaPredicted RBP12.95□□□□□ -0.34
VARS2-210ENST00000490699 CYP21A2P08686 494 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
VARS2-210ENST00000490699 RRP12Q5JTH9 1297 aaKnown RBP12.95□□□□□ -0.34
VARS2-210ENST00000490699 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 STAG1Q8WVM7 1258 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 PGAP2Q9UHJ9 254 aa12.95□□□□□ -0.34
VARS2-210ENST00000490699 MYH8P13535 1937 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 ERICH2A1L162 156 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 DDTLA6NHG4 134 aaPredicted RBP12.94□□□□□ -0.34
VARS2-210ENST00000490699 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 CYP2D6P10635 497 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
VARS2-210ENST00000490699 FGD1P98174 961 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 TTLL12Q14166 644 aaPredicted RBP12.94□□□□□ -0.34
VARS2-210ENST00000490699 C16orf86Q6ZW13 317 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 STK11IPQ8N1F8 1099 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 DCBLD2Q96PD2 775 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
VARS2-210ENST00000490699 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 E7EWF7 191 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 TBC1D12O60347 775 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
VARS2-210ENST00000490699 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 PLCD1P51178 756 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
VARS2-210ENST00000490699 TSGA10IPQ3SY00 556 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 CCDC178Q5BJE1 867 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
VARS2-210ENST00000490699 BLOC1S2Q6QNY1 142 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 ZFPM1Q8IX07 1006 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 SMC1BQ8NDV3 1235 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
VARS2-210ENST00000490699 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 NEK1Q96PY6 1258 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 UBAC1Q9BSL1 405 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
VARS2-210ENST00000490699 UTRNP46939 3433 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 MPHOSPH10O00566 681 aaKnown RBP12.92□□□□□ -0.34
VARS2-210ENST00000490699 ORC4O43929 436 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 MCM5P33992 734 aa12.92□□□□□ -0.34
VARS2-210ENST00000490699 IREB2P48200 963 aaKnown RBP12.92□□□□□ -0.34
VARS2-210ENST00000490699 CDK8P49336 464 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms