RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 IQUBQ8NA54 791 aa14.49□□□□□ -0.09
SHOX2-205ENST00000490689 MAST3O60307 1309 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 OPA1O60313 960 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 ERLIN2O94905 339 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 RBL2Q08999 1139 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 ERCC6L2Q5T890 1561 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 KRT23Q9C075 422 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 V9GY48 417 aaPredicted RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 ATP7BP35670 1465 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 IFIT1BQ5T764 474 aaKnown RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 ARMT1Q9H993 441 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 VPS54Q9P1Q0 977 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 WWC3Q9ULE0 1092 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 MRPS25P82663 173 aaKnown RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 MTF1Q14872 753 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 EXOC4Q96A65 974 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 MYO6Q9UM54 1294 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 SHROOM2Q13796 1616 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 TUBBP07437 444 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 SLC5A1P13866 664 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 ATP1A2P50993 1020 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 TBC1D8BQ0IIM8 1120 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 PRPF4BQ13523 1007 aaKnown RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 STOX1Q6ZVD7 989 aa14.48□□□□□ -0.09
SHOX2-205ENST00000490689 MKRN1Q9UHC7 482 aaKnown RBP14.48□□□□□ -0.09
SHOX2-205ENST00000490689 TADA3O75528 432 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 CYP7A1P22680 504 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 NCAPH2Q6IBW4 605 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 BCAS4Q8TDM0 211 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 OSBP2Q969R2 916 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 COPRSQ9NQ92 184 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 CASP1P29466 404 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 ASIC1P78348 528 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 BICDL1Q6ZP65 573 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 NOSTRINQ8IVI9 506 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 M0R2C6 588 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 STARD3NLO95772 234 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 ADORA1P30542 326 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 IGHMBP2P38935 993 aaKnown RBP14.47□□□□□ -0.09
SHOX2-205ENST00000490689 PTPN12Q05209 780 aaKnown RBP14.47□□□□□ -0.09
SHOX2-205ENST00000490689 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 ANKLE2Q86XL3 938 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 JAKMIP2Q96AA8 810 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
SHOX2-205ENST00000490689 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.47□□□□□ -0.09
SHOX2-205ENST00000490689 FOXN1O15353 648 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 TUBB4BP68371 445 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 COL9A3Q14050 684 aaPredicted RBP14.46□□□□□ -0.09
SHOX2-205ENST00000490689 CFAP58Q5T655 872 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 RMND1Q9NWS8 449 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 SAR1BQ9Y6B6 198 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 SALL3Q9BXA9 1300 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 ZPR1O75312 459 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 KRT2P35908 639 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 VAV2P52735 878 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 CASP8Q14790 479 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 ZFYVE27Q5T4F4 411 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 ANKRD18AQ8IVF6 992 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 ESR2Q92731 530 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
SHOX2-205ENST00000490689 TSPY2A6NKD2 308 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 ATP8B1O43520 1251 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 RNF40O75150 1001 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 LTKP29376 864 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 PLA2G4AP47712 749 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 CCDC40Q4G0X9 1142 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 ZMYM1Q5SVZ6 1142 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 CCDC114Q96M63 670 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 NAA15Q9BXJ9 866 aaKnown RBP14.46□□□□□ -0.1
SHOX2-205ENST00000490689 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 EXOC1Q9NV70 894 aa14.46□□□□□ -0.1
SHOX2-205ENST00000490689 FAM170AA1A519 330 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 NR5A1Q13285 461 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 GBP6Q6ZN66 633 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 MKNK2Q9HBH9 465 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 SAMM50Q9Y512 469 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 GNGT1P63211 74 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 DYDC1Q8WWB3 177 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 MAN1B1Q9UKM7 699 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 JRKLQ9Y4A0 524 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 CHD1O14646 1710 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
SHOX2-205ENST00000490689 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 KCTD16Q68DU8 428 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 TTLL7Q6ZT98 887 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 PIK3AP1Q6ZUJ8 805 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 TMEM51Q9NW97 253 aa14.45□□□□□ -0.1
SHOX2-205ENST00000490689 IGKV5-2P06315 115 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 NF2P35240 595 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 PAK1Q13153 545 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 TMEM87BQ96K49 555 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 UBA5Q9GZZ9 404 aa14.44□□□□□ -0.1
SHOX2-205ENST00000490689 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms