RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 GPAT2Q6NUI2 795 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 OSBPL5Q9H0X9 879 aaPredicted RBP13.79□□□□□ -0.2
DUBR-204ENST00000490441 SNRKQ9NRH2 765 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 SRRDQ9UH36 339 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 AFG3L2Q9Y4W6 797 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
DUBR-204ENST00000490441 ZSWIM8A7E2V4 1837 aa13.78□□□□□ -0.2
DUBR-204ENST00000490441 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
DUBR-204ENST00000490441 SLC45A1Q9Y2W3 748 aa13.78□□□□□ -0.2
DUBR-204ENST00000490441 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
DUBR-204ENST00000490441 COL2A1P02458 1487 aaPredicted RBP13.78□□□□□ -0.2
DUBR-204ENST00000490441 CENPFP49454 3210 aa13.78□□□□□ -0.2
DUBR-204ENST00000490441 FAM196BA6NMK8 535 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 SLURP2P0DP57 97 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 BCRP11274 1271 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 OSBPP22059 807 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
DUBR-204ENST00000490441 GCC1Q96CN9 775 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 TBC1D2Q9BYX2 928 aa13.77□□□□□ -0.21
DUBR-204ENST00000490441 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.21
DUBR-204ENST00000490441 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
DUBR-204ENST00000490441 NOP58Q9Y2X3 529 aaKnown RBP13.77□□□□□ -0.21
DUBR-204ENST00000490441 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 ZBTB7BO15156 539 aaPredicted RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 IGSF3O75054 1194 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 RLBP1P12271 317 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 CTGFP29279 349 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 GRK4P32298 578 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 ZNF512BQ96KM6 892 aaPredicted RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 DHX36Q9H2U1 1008 aaKnown RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
DUBR-204ENST00000490441 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 AGTPBP1Q9UPW5 1226 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
DUBR-204ENST00000490441 PTPRFP10586 1907 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 UBXN2AP68543 259 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 PRKCZQ05513 592 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 ZNF280CQ8ND82 737 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
DUBR-204ENST00000490441 AS3MTQ9HBK9 375 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 ZBTB47Q9UFB7 747 aaPredicted RBP13.75□□□□□ -0.21
DUBR-204ENST00000490441 CEP290O15078 2479 aa13.75□□□□□ -0.21
DUBR-204ENST00000490441 USP17L5A8MUK1 530 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
DUBR-204ENST00000490441 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
DUBR-204ENST00000490441 MS4A1P11836 297 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 CAP2P40123 477 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 ZAP70P43403 619 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 PPP4CP60510 307 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 SPP2Q13103 211 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.21
DUBR-204ENST00000490441 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 MAPKAPK5Q8IW41 473 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
DUBR-204ENST00000490441 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
DUBR-204ENST00000490441 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 TGFBRAP1Q8WUH2 860 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 DBNLQ9UJU6 430 aaKnown RBP13.74□□□□□ -0.21
DUBR-204ENST00000490441 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
DUBR-204ENST00000490441 FLT1P17948 1338 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
DUBR-204ENST00000490441 HLA-DOAP06340 250 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 CYP7A1P22680 504 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 HMGCS2P54868 508 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 HSP90AB4PQ58FF6 505 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
DUBR-204ENST00000490441 PIH1D3Q9NQM4 214 aaKnown RBP13.73□□□□□ -0.21
DUBR-204ENST00000490441 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
DUBR-204ENST00000490441 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
DUBR-204ENST00000490441 ASNSP08243 561 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 MTFR1Q15390 333 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 ADGRA1Q86SQ6 560 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 AACSQ86V21 672 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 CERS3Q8IU89 383 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
DUBR-204ENST00000490441 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 COA7Q96BR5 231 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 EAF2Q96CJ1 260 aaPredicted RBP13.72□□□□□ -0.21
DUBR-204ENST00000490441 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 MGAMO43451 1857 aa13.72□□□□□ -0.21
DUBR-204ENST00000490441 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 BRCA2P51587 3418 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 ADCY3O60266 1144 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 CCL5P13501 91 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 GCLCP48506 637 aaPredicted RBP13.71□□□□□ -0.21
DUBR-204ENST00000490441 FLT3LGP49771 235 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 MAP3K12Q12852 859 aa13.71□□□□□ -0.21
DUBR-204ENST00000490441 FAM110CQ1W6H9 321 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms