RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 IDI2Q9BXS1 227 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 DDX60LQ5H9U9 1706 aaKnown RBP20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 HIP1O00291 1037 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 MBD4O95243 580 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 CHMLP26374 656 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 NMIQ13287 307 aaPredicted RBP20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 NOM1Q5C9Z4 860 aaKnown RBP20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 DCAF15Q66K64 600 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 LCORLQ8N3X6 602 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 WRNIP1Q96S55 665 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 HELLSQ9NRZ9 838 aa20.51■□□□□ 0.87
RAPGEF3-212ENST00000490387 IGF2BP3O00425 579 aaKnown RBP eCLIP20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 NPM3O75607 178 aaKnown RBP20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 TCP10Q12799 353 aa20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 NFIAQ12857 509 aa20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 ARMT1Q9H993 441 aa20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 DDX4Q9NQI0 724 aaKnown RBP20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 FAM198AQ9UFP1 575 aa20.5■□□□□ 0.87
RAPGEF3-212ENST00000490387 GPAA1O43292 621 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 FKTNO75072 461 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 OTUD5Q96G74 571 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 STRBPQ96SI9 672 aaKnown RBP20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 R3HDMLQ9H3Y0 253 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 DIAPH3Q9NSV4 1193 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 NAV1Q8NEY1 1877 aa20.49■□□□□ 0.87
RAPGEF3-212ENST00000490387 MCMDC2Q4G0Z9 681 aa20.48■□□□□ 0.87
RAPGEF3-212ENST00000490387 TEX11Q8IYF3 940 aa20.48■□□□□ 0.87
RAPGEF3-212ENST00000490387 ZNF341Q9BYN7 854 aa20.48■□□□□ 0.87
RAPGEF3-212ENST00000490387 IL25Q9H293 177 aa20.48■□□□□ 0.87
RAPGEF3-212ENST00000490387 TESPA1A2RU30 521 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 PKN2Q16513 984 aaKnown RBP20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 CWC27Q6UX04 472 aaKnown RBP20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 MIGA2Q7L4E1 593 aa20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 ZNF589Q86UQ0 364 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 SNCAIPQ9Y6H5 919 aa20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 COL2A1P02458 1487 aaPredicted RBP20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 MYH1P12882 1939 aa20.47■□□□□ 0.87
RAPGEF3-212ENST00000490387 SPDYE5A6NIY4 337 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 FOXP2O15409 715 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 ENTPD3O75355 529 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 GTF2A2P52657 109 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 ZKSCAN4Q969J2 545 aaPredicted RBP20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 CRNKL1Q9BZJ0 848 aaKnown RBP20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 BAZ2AQ9UIF9 1905 aaKnown RBP20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 FLT1P17948 1338 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 RAD50Q92878 1312 aa20.46■□□□□ 0.87
RAPGEF3-212ENST00000490387 CCL15-CCL14A0A0B4J2E2 113 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 PRKAB2O43741 272 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 CDC45O75419 566 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 CCL15Q16663 113 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 ERO1BQ86YB8 467 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 ZFPM1Q8IX07 1006 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 TGFBRAP1Q8WUH2 860 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 MS4A4AQ96JQ5 239 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 PTPN18Q99952 460 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 SIPA1L1O43166 1804 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 CCDC171Q6TFL3 1326 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 ATRNL1Q5VV63 1379 aa20.45■□□□□ 0.86
RAPGEF3-212ENST00000490387 SGSM2O43147 1006 aa20.44■□□□□ 0.86
RAPGEF3-212ENST00000490387 CRHR2Q13324 411 aa20.44■□□□□ 0.86
RAPGEF3-212ENST00000490387 SDR42E1Q8WUS8 393 aa20.44■□□□□ 0.86
RAPGEF3-212ENST00000490387 BRI3BPQ8WY22 251 aa20.44■□□□□ 0.86
RAPGEF3-212ENST00000490387 DCP1AQ9NPI6 582 aaPredicted RBP20.44■□□□□ 0.86
RAPGEF3-212ENST00000490387 GSG1L2A8MUP6 293 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 GNAT2P19087 354 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 INPP5BP32019 993 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 PICALMQ13492 652 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 SH3BP5LQ7L8J4 393 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 MAPKAPK5Q8IW41 473 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 RUFY2Q8WXA3 655 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 ATP8A2Q9NTI2 1148 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 HPS5Q9UPZ3 1129 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 SLC4A4Q9Y6R1 1079 aa20.43■□□□□ 0.86
RAPGEF3-212ENST00000490387 USP5P45974 858 aa20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 PPIL2Q13356 520 aa20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 VPS53Q5VIR6 699 aa20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 ZSCAN29Q8IWY8 852 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 ESYT1Q9BSJ8 1104 aa20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 EPB41L4AQ9HCS5 686 aaPredicted RBP20.42■□□□□ 0.86
RAPGEF3-212ENST00000490387 PATL2C9JE40 543 aaKnown RBP20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 CETPP11597 493 aa20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 TAF1CQ15572 869 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 GIMAP6Q6P9H5 292 aa20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 FBXO46Q6PJ61 603 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 ZNF112Q9UJU3 913 aa20.41■□□□□ 0.86
RAPGEF3-212ENST00000490387 DDTLA6NHG4 134 aaPredicted RBP20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 IRF6O14896 467 aa20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 RGS19P49795 217 aa20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 MFAP1P55081 439 aaKnown RBP20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 PPATQ06203 517 aa20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
RAPGEF3-212ENST00000490387 ZFYVE28Q9HCC9 887 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms