RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ZNF157P51786 506 aaPredicted RBP6.65□□□□□ -1.34
RBM39-235ENST00000490354 ECM1Q16610 540 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 NETO1Q8TDF5 533 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 PIDD1Q9HB75 910 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 U3KQE9 123 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 ABCC5O15440 1437 aa6.65□□□□□ -1.35
RBM39-235ENST00000490354 KIAA1107Q9UPP5 1409 aa6.65□□□□□ -1.35
RBM39-235ENST00000490354 RNASE1P07998 156 aaKnown RBP6.64□□□□□ -1.35
RBM39-235ENST00000490354 CD96P40200 585 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 HNRNPMP52272 730 aaKnown RBP eCLIP6.64□□□□□ -1.35
RBM39-235ENST00000490354 PTPN12Q05209 780 aaKnown RBP6.64□□□□□ -1.35
RBM39-235ENST00000490354 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 ZNF124Q15973 351 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 RC3H2Q9HBD1 1191 aaKnown RBP6.64□□□□□ -1.35
RBM39-235ENST00000490354 EGFL7Q9UHF1 273 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 ROCK1Q13464 1354 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.64□□□□□ -1.35
RBM39-235ENST00000490354 RIMBP3CA6NJZ7 1639 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 RIMBP3BA6NNM3 1639 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 KIF14Q15058 1648 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 RIMBP3Q9UFD9 1639 aa6.64□□□□□ -1.35
RBM39-235ENST00000490354 H3BRB1 525 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 ZNF862O60290 1169 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 ID3Q02535 119 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
RBM39-235ENST00000490354 ATG4DQ86TL0 474 aaPredicted RBP6.63□□□□□ -1.35
RBM39-235ENST00000490354 SMYD4Q8IYR2 804 aaPredicted RBP6.63□□□□□ -1.35
RBM39-235ENST00000490354 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 FAM129BQ96TA1 746 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 SETD5Q9C0A6 1442 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 ATXN3LQ9H3M9 355 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 TUT1Q9H6E5 874 aaKnown RBP6.63□□□□□ -1.35
RBM39-235ENST00000490354 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 MBNL3Q9NUK0 354 aaKnown RBP6.63□□□□□ -1.35
RBM39-235ENST00000490354 MBD5Q9P267 1494 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
RBM39-235ENST00000490354 ZCCHC11Q5TAX3 1644 aaKnown RBP6.62□□□□□ -1.35
RBM39-235ENST00000490354 MAPKBP1O60336 1514 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 PLEKHH2Q8IVE3 1493 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 HFM1A2PYH4 1435 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 DAPK1P53355 1430 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 CD109Q6YHK3 1445 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 AKNAQ7Z591 1439 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 LEFTY1O75610 366 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 SLFN14P0C7P3 912 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 SERPINB4P48594 390 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 ARHGAP4P98171 946 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 PRKCQQ04759 706 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 RPS26P11Q5JNZ5 115 aaPredicted RBP6.62□□□□□ -1.35
RBM39-235ENST00000490354 GLYCTKQ8IVS8 523 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 FAM168AQ92567 244 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 PCDHGC5Q9Y5F6 944 aa6.62□□□□□ -1.35
RBM39-235ENST00000490354 ARAP3Q8WWN8 1544 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 CAMSAP2Q08AD1 1489 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 RAB3GAP2Q9H2M9 1393 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 NDUFB5O43674 189 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
RBM39-235ENST00000490354 GADD45BO75293 160 aaPredicted RBP6.61□□□□□ -1.35
RBM39-235ENST00000490354 HCLS1P14317 486 aaPredicted RBP6.61□□□□□ -1.35
RBM39-235ENST00000490354 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 KIF4BQ2VIQ3 1234 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 CCER1Q8TC90 406 aaPredicted RBP6.61□□□□□ -1.35
RBM39-235ENST00000490354 CCDC74AQ96AQ1 378 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 RRP7BPQ9NSQ0 103 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 PTPN23Q9H3S7 1636 aa6.61□□□□□ -1.35
RBM39-235ENST00000490354 NAIPQ13075 1403 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 NCOA1Q15788 1441 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 ANKRD30AQ9BXX3 1397 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 EIF1AYO14602 144 aaKnown RBP6.6□□□□□ -1.35
RBM39-235ENST00000490354 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
RBM39-235ENST00000490354 ZEB1P37275 1124 aaPredicted RBP6.6□□□□□ -1.35
RBM39-235ENST00000490354 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 IFI16Q16666 785 aaKnown RBP6.6□□□□□ -1.35
RBM39-235ENST00000490354 AOC3Q16853 763 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 LRRN4CLQ8ND94 238 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 KRT82Q9NSB4 513 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 ARHGAP5Q13017 1502 aa6.6□□□□□ -1.35
RBM39-235ENST00000490354 CLSPNQ9HAW4 1339 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 GPR182O15218 404 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 FARP2O94887 1054 aaPredicted RBP6.59□□□□□ -1.35
RBM39-235ENST00000490354 CEACAM5P06731 702 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 OXCT1P55809 520 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 GRM2Q14416 872 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 ARHGAP27Q6ZUM4 889 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 AFAP1Q8N556 730 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 NIF3L1Q9GZT8 377 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 DNAJC25Q9H1X3 360 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 MKNK2Q9HBH9 465 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 PLAGL2Q9UPG8 496 aa6.59□□□□□ -1.35
RBM39-235ENST00000490354 FANCAO15360 1455 aa6.59□□□□□ -1.36
RBM39-235ENST00000490354 SHANK2Q9UPX8 1470 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms