RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 KIAA1211Q6ZU35 1233 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 CSRNP1Q96S65 589 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 LSG1Q9H089 658 aaKnown RBP14.89□□□□□ -0.03
HDAC1-210ENST00000490081 NAPBQ9H115 298 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 ZNF112Q9UJU3 913 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 PPP1R12BO60237 982 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-210ENST00000490081 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-210ENST00000490081 FGRP09769 529 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
HDAC1-210ENST00000490081 TATDN1Q6P1N9 297 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 ZSCAN29Q8IWY8 852 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-210ENST00000490081 SWAP70Q9UH65 585 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 SERPINB13Q9UIV8 391 aa14.88□□□□□ -0.03
HDAC1-210ENST00000490081 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-210ENST00000490081 TRAF5O00463 557 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 USP2O75604 605 aaPredicted RBP14.87□□□□□ -0.03
HDAC1-210ENST00000490081 TDO2P48775 406 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 PLCD1P51178 756 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 PTH1RQ03431 593 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 CST9Q5W186 159 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 SCAF8Q9UPN6 1271 aaKnown RBP14.87□□□□□ -0.03
HDAC1-210ENST00000490081 LAMB1P07942 1786 aa14.87□□□□□ -0.03
HDAC1-210ENST00000490081 SSC5DA1L4H1 1573 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 PAPPA2Q9BXP8 1791 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 PHF20L1A8MW92 1017 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 LDLRAD1Q5T700 205 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 PRAMEF18Q5VWM3 479 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 C16orf86Q6ZW13 317 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 HHIPL1Q96JK4 782 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 ZNF341Q9BYN7 854 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 SAP30BPQ9UHR5 308 aaKnown RBP14.86□□□□□ -0.03
HDAC1-210ENST00000490081 LAMA4Q16363 1823 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 PCNTO95613 3336 aa14.86□□□□□ -0.03
HDAC1-210ENST00000490081 SLC3A2P08195 630 aaKnown RBP14.85□□□□□ -0.03
HDAC1-210ENST00000490081 PPARAQ07869 468 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 NECTIN1Q15223 517 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 TSGA10IPQ3SY00 556 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 C8orf34Q49A92 452 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 ARMC9Q7Z3E5 817 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 C2orf69Q8N8R5 385 aa14.85□□□□□ -0.03
HDAC1-210ENST00000490081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.85□□□□□ -0.03
HDAC1-210ENST00000490081 RASSF10A6NK89 507 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 ZNF213O14771 459 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 CTNND1O60716 968 aaKnown RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 CELF2O95319 508 aaKnown RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 VEGFBP49765 207 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 IMMTQ16891 758 aaKnown RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 NOL9Q5SY16 702 aaKnown RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 DLK2Q6UY11 383 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 KCNB2Q92953 911 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 USP26Q9BXU7 913 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 DNAJC18Q9H819 358 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 GBA2Q9HCG7 927 aaPredicted RBP14.84□□□□□ -0.03
HDAC1-210ENST00000490081 ANO2Q9NQ90 1003 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 MYH8P13535 1937 aa14.84□□□□□ -0.03
HDAC1-210ENST00000490081 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 ORC4O43929 436 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 CYP2D6P10635 497 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 CDK8P49336 464 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 FMR1Q06787 632 aaKnown RBP eCLIP14.83□□□□□ -0.046e-7■□□□□ 9.4
HDAC1-210ENST00000490081 PDE4BQ07343 736 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 CRACR2BQ8N4Y2 399 aaPredicted RBP14.83□□□□□ -0.04
HDAC1-210ENST00000490081 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.04
HDAC1-210ENST00000490081 RNF41Q9H4P4 317 aaPredicted RBP14.83□□□□□ -0.04
HDAC1-210ENST00000490081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC1-210ENST00000490081 CYP2D7A0A087X1C5 515 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 SHMT1P34896 483 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 CAP2P40123 477 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 AKNAD1Q5T1N1 836 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 ANKRD13AQ8IZ07 590 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 TRIM34Q9BYJ4 488 aa14.82□□□□□ -0.04
HDAC1-210ENST00000490081 RBM8AQ9Y5S9 174 aaKnown RBP14.82□□□□□ -0.04
HDAC1-210ENST00000490081 FOXN1O15353 648 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 CYP21A2P08686 494 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 HSPA4P34932 840 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.81□□□□□ -0.04
HDAC1-210ENST00000490081 SAPCD2Q86UD0 394 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 IL17RAQ96F46 866 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 TBC1D2Q9BYX2 928 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 NBPF3Q9H094 633 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 CNNM2Q9H8M5 875 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 ANGEL1Q9UNK9 670 aaKnown RBP14.81□□□□□ -0.04
HDAC1-210ENST00000490081 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
HDAC1-210ENST00000490081 RASA1P20936 1047 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 EVX2Q03828 476 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 DEFB115Q30KQ5 88 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-210ENST00000490081 MFSD6Q6ZSS7 791 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 TNS4Q8IZW8 715 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms