RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SASH1O94885 1247 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 SRFP11831 508 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 INSRRP14616 1297 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 PUM1Q14671 1186 aaKnown RBP eCLIP5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 TCERG1LQ5VWI1 586 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 CCDC74AQ96AQ1 378 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 NRSN2Q9GZP1 204 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 EHD4Q9H223 541 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 ZFYVE1Q9HBF4 777 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 FAM105AQ9NUU6 356 aa5.27□□□□□ -1.57
DEPDC1-204ENST00000489862 SOWAHDA6NJG2 315 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 CTSBP07858 339 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 SRRDQ9UH36 339 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 DYNC1LI2O43237 492 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 ECEL1O95672 775 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 MAOBP27338 520 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 RGS22Q8NE09 1264 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 RBCK1Q9BYM8 510 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 ZNF576Q9H609 170 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 RAD18Q9NS91 495 aa5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 BIN2Q9UBW5 565 aaPredicted RBP5.26□□□□□ -1.57
DEPDC1-204ENST00000489862 GADD45BO75293 160 aaPredicted RBP5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 ITPKAP23677 461 aa5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 POU4F3Q15319 338 aa5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 AKAP4Q5JQC9 854 aa5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 EPS8L3Q8TE67 593 aaKnown RBP5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 TRIM56Q9BRZ2 755 aaKnown RBP5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 DNAJC25Q9H1X3 360 aa5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 AP4E1Q9UPM8 1137 aa5.25□□□□□ -1.57
DEPDC1-204ENST00000489862 B3GALT4O96024 378 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 OXCT1P55809 520 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 TMC7Q7Z402 723 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 TMEM151BQ8IW70 566 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 DMRTB1Q96MA1 342 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 GSX1Q9H4S2 264 aaPredicted RBP5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 LGR6Q9HBX8 967 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 ABCB6Q9NP58 842 aa5.24□□□□□ -1.57
DEPDC1-204ENST00000489862 BRD1O95696 1058 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 CYP11A1P05108 521 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 ZNF157P51786 506 aaPredicted RBP5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 GRM2Q14416 872 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 PI16Q6UXB8 463 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 ALKBH8Q96BT7 664 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 CCDC120Q96HB5 630 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 GPR20Q99678 358 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 TNKS2Q9H2K2 1166 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 PLAGL2Q9UPG8 496 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 GNEQ9Y223 722 aaKnown RBP5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
DEPDC1-204ENST00000489862 GDNFP39905 211 aa5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 FAAP100Q0VG06 881 aa5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 ZNF385BQ569K4 471 aa5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 PRPF40BQ6NWY9 871 aaKnown RBP5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 BAHD1Q8TBE0 780 aaPredicted RBP5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 DCTN4Q9UJW0 460 aa5.22□□□□□ -1.57
DEPDC1-204ENST00000489862 PTPN12Q05209 780 aaKnown RBP5.21□□□□□ -1.58
DEPDC1-204ENST00000489862 EFEMP1Q12805 493 aa5.21□□□□□ -1.58
DEPDC1-204ENST00000489862 AEBP1Q8IUX7 1158 aa5.21□□□□□ -1.58
DEPDC1-204ENST00000489862 DDX54Q8TDD1 881 aaKnown RBP5.21□□□□□ -1.58
DEPDC1-204ENST00000489862 ZC3H12CQ9C0D7 883 aaKnown RBP5.21□□□□□ -1.58
DEPDC1-204ENST00000489862 RFXAPO00287 272 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 MAPK1P28482 360 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 FCGRTP55899 365 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 PDE3AQ14432 1141 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 XYLT2Q9H1B5 865 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 KCNK12Q9HB15 430 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 TRAK1Q9UPV9 953 aa5.2□□□□□ -1.58
DEPDC1-204ENST00000489862 TRIM13O60858 407 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 AOC2O75106 756 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 ITIH2P19823 946 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 PLCB3Q01970 1234 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 DSC3Q14574 896 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 DTHD1Q6ZMT9 781 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 WDR89Q96FK6 387 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 BCO2Q9BYV7 579 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 NLRP2Q9NX02 1062 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 IVNS1ABPQ9Y6Y0 642 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 PNMA6FA0A0J9YX94 578 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 LIG1P18858 919 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 ZXDAP98168 799 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 RPS26P11Q5JNZ5 115 aaPredicted RBP5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 WDR18Q9BV38 432 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 TRAIPQ9BWF2 469 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 PALD1Q9ULE6 856 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 PPP1R9AQ9ULJ8 1098 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 CNOT6Q9ULM6 557 aaKnown RBP5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 U3KQE9 123 aa5.19□□□□□ -1.58
DEPDC1-204ENST00000489862 TREHO43280 583 aa5.18□□□□□ -1.58
DEPDC1-204ENST00000489862 RAC2P15153 192 aa5.18□□□□□ -1.58
DEPDC1-204ENST00000489862 AP3B2Q13367 1082 aa5.18□□□□□ -1.58
DEPDC1-204ENST00000489862 NXPE4Q6UWF7 544 aa5.18□□□□□ -1.58
DEPDC1-204ENST00000489862 CCDC86Q9H6F5 360 aaKnown RBP5.18□□□□□ -1.58
DEPDC1-204ENST00000489862 ENOX2Q16206 610 aaKnown RBP5.17□□□□□ -1.58
DEPDC1-204ENST00000489862 SETDB2Q96T68 719 aa5.17□□□□□ -1.58
DEPDC1-204ENST00000489862 PIDD1Q9HB75 910 aa5.17□□□□□ -1.58
DEPDC1-204ENST00000489862 PPP4R2Q9NY27 417 aa5.17□□□□□ -1.58
DEPDC1-204ENST00000489862 GPN3Q9UHW5 284 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms