RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TTC41PQ6P2S7 1318 aa23.13■■□□□ 1.29
EPHB4-207ENST00000489808 GPR25O00155 361 aa23.13■■□□□ 1.29
EPHB4-207ENST00000489808 PTPRAP18433 802 aa23.13■■□□□ 1.29
EPHB4-207ENST00000489808 UBE3CQ15386 1083 aa23.13■■□□□ 1.29
EPHB4-207ENST00000489808 ZHX2Q9Y6X8 837 aa23.13■■□□□ 1.29
EPHB4-207ENST00000489808 MYO5AQ9Y4I1 1855 aaKnown RBP23.13■■□□□ 1.29
EPHB4-207ENST00000489808 AK9Q5TCS8 1911 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 CXCL11O14625 94 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 ERC2O15083 957 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 IGHDP01880 384 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 CHGBP05060 677 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
EPHB4-207ENST00000489808 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 ZSCAN25Q6NSZ9 544 aa23.12■■□□□ 1.29
EPHB4-207ENST00000489808 CRNKL1Q9BZJ0 848 aaKnown RBP23.12■■□□□ 1.29
EPHB4-207ENST00000489808 OTOFQ9HC10 1997 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 HLA-DOAP06340 250 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 CAP2P40123 477 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 KBTBD3Q8NAB2 608 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 PI4K2BQ8TCG2 481 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 ZNF296Q8WUU4 475 aaPredicted RBP23.11■■□□□ 1.29
EPHB4-207ENST00000489808 MAST2Q6P0Q8 1798 aa23.11■■□□□ 1.29
EPHB4-207ENST00000489808 BTBD19C9JJ37 291 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 GLRX3O76003 335 aaKnown RBP23.1■■□□□ 1.29
EPHB4-207ENST00000489808 MX1P20591 662 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 FAM43AQ8N2R8 423 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 LCORLQ8N3X6 602 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 ARMT1Q9H993 441 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 AFG3L2Q9Y4W6 797 aa23.1■■□□□ 1.29
EPHB4-207ENST00000489808 CRHR2Q13324 411 aa23.09■■□□□ 1.29
EPHB4-207ENST00000489808 TTC6Q86TZ1 520 aa23.09■■□□□ 1.29
EPHB4-207ENST00000489808 CRACR2BQ8N4Y2 399 aaPredicted RBP23.09■■□□□ 1.29
EPHB4-207ENST00000489808 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
EPHB4-207ENST00000489808 DNAJC18Q9H819 358 aa23.09■■□□□ 1.29
EPHB4-207ENST00000489808 SALL3Q9BXA9 1300 aa23.08■■□□□ 1.29
EPHB4-207ENST00000489808 MBD4O95243 580 aa23.08■■□□□ 1.29
EPHB4-207ENST00000489808 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.29
EPHB4-207ENST00000489808 ZCCHC17Q9NP64 241 aaKnown RBP23.08■■□□□ 1.29
EPHB4-207ENST00000489808 STAP2Q9UGK3 403 aa23.08■■□□□ 1.29
EPHB4-207ENST00000489808 FKTNO75072 461 aa23.07■■□□□ 1.28
EPHB4-207ENST00000489808 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
EPHB4-207ENST00000489808 MOGSQ13724 837 aa23.07■■□□□ 1.28
EPHB4-207ENST00000489808 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
EPHB4-207ENST00000489808 PUS7LQ9H0K6 701 aaKnown RBP23.07■■□□□ 1.28
EPHB4-207ENST00000489808 ZFYVE28Q9HCC9 887 aa23.07■■□□□ 1.28
EPHB4-207ENST00000489808 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
EPHB4-207ENST00000489808 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
EPHB4-207ENST00000489808 DOCK2Q92608 1830 aa23.07■■□□□ 1.28
EPHB4-207ENST00000489808 RNF113AO15541 343 aaKnown RBP23.06■■□□□ 1.28
EPHB4-207ENST00000489808 PRKAB2O43741 272 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 POLR3DP05423 398 aaPredicted RBP23.06■■□□□ 1.28
EPHB4-207ENST00000489808 PLCD1P51178 756 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 DGKZQ13574 1117 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 TAF1CQ15572 869 aaPredicted RBP23.06■■□□□ 1.28
EPHB4-207ENST00000489808 B4GALNT3Q6L9W6 998 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 ANKRD23Q86SG2 305 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 CCDC84Q86UT8 332 aaPredicted RBP23.06■■□□□ 1.28
EPHB4-207ENST00000489808 EHD4Q9H223 541 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 MCM9Q9NXL9 1143 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 SERPINB13Q9UIV8 391 aa23.06■■□□□ 1.28
EPHB4-207ENST00000489808 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
EPHB4-207ENST00000489808 PDE1AP54750 535 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 JAG1P78504 1218 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 FASTKD5Q7L8L6 764 aaKnown RBP23.05■■□□□ 1.28
EPHB4-207ENST00000489808 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
EPHB4-207ENST00000489808 LNPKQ9C0E8 428 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 MCOLN1Q9GZU1 580 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 ATP8A2Q9NTI2 1148 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 CASP8AP2Q9UKL3 1982 aa23.05■■□□□ 1.28
EPHB4-207ENST00000489808 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
EPHB4-207ENST00000489808 ZFYP08048 801 aaPredicted RBP23.04■■□□□ 1.28
EPHB4-207ENST00000489808 GPAT2Q6NUI2 795 aa23.04■■□□□ 1.28
EPHB4-207ENST00000489808 CTU1Q7Z7A3 348 aaKnown RBP23.04■■□□□ 1.28
EPHB4-207ENST00000489808 TBC1D2Q9BYX2 928 aa23.04■■□□□ 1.28
EPHB4-207ENST00000489808 GINM1Q9NU53 330 aa23.04■■□□□ 1.28
EPHB4-207ENST00000489808 TRIM75PA6NK02 468 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 ASNSP08243 561 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 NUCB1Q02818 461 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
EPHB4-207ENST00000489808 TATDN1Q6P1N9 297 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 ZNF280CQ8ND82 737 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 APPBP2Q92624 585 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 OSBP2Q969R2 916 aa23.03■■□□□ 1.28
EPHB4-207ENST00000489808 STRBPQ96SI9 672 aaKnown RBP23.03■■□□□ 1.28
EPHB4-207ENST00000489808 PDHXO00330 501 aa23.02■■□□□ 1.28
EPHB4-207ENST00000489808 GABPAQ06546 454 aa23.02■■□□□ 1.28
EPHB4-207ENST00000489808 SPP2Q13103 211 aa23.02■■□□□ 1.28
EPHB4-207ENST00000489808 CHD1LQ86WJ1 897 aa23.02■■□□□ 1.28
EPHB4-207ENST00000489808 SLC4A4Q9Y6R1 1079 aa23.02■■□□□ 1.28
EPHB4-207ENST00000489808 TLR2O60603 784 aa23.01■■□□□ 1.27
EPHB4-207ENST00000489808 GDF11O95390 407 aa23.01■■□□□ 1.27
EPHB4-207ENST00000489808 SP3Q02447 781 aa23.01■■□□□ 1.27
EPHB4-207ENST00000489808 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
EPHB4-207ENST00000489808 ABHD8Q96I13 439 aa23.01■■□□□ 1.27
EPHB4-207ENST00000489808 WDR18Q9BV38 432 aa23.01■■□□□ 1.27
EPHB4-207ENST00000489808 CYP2D6P10635 497 aa23■■□□□ 1.27
EPHB4-207ENST00000489808 EVX2Q03828 476 aa23■■□□□ 1.27
EPHB4-207ENST00000489808 CERKLQ49MI3 558 aaPredicted RBP23■■□□□ 1.27
EPHB4-207ENST00000489808 GADL1Q6ZQY3 521 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms