RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 HMG20BQ9P0W2 317 aa20.98■□□□□ 0.95
TOP3B-217ENST00000489581 OSBPL5Q9H0X9 879 aaPredicted RBP20.97■□□□□ 0.95
TOP3B-217ENST00000489581 PNMA3Q9UL41 463 aa20.97■□□□□ 0.95
TOP3B-217ENST00000489581 ALPK3Q96L96 1907 aa20.97■□□□□ 0.95
TOP3B-217ENST00000489581 EVI5O60447 810 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
TOP3B-217ENST00000489581 LDHCP07864 332 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 GNAI3P08754 354 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 FAM110CQ1W6H9 321 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 GORABQ5T7V8 394 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 PROCA1Q8NCQ7 364 aaPredicted RBP20.96■□□□□ 0.95
TOP3B-217ENST00000489581 NSUN4Q96CB9 384 aaKnown RBP20.96■□□□□ 0.95
TOP3B-217ENST00000489581 PAK6Q9NQU5 681 aaPredicted RBP20.96■□□□□ 0.95
TOP3B-217ENST00000489581 RAI14Q9P0K7 980 aa20.96■□□□□ 0.95
TOP3B-217ENST00000489581 RARSP54136 660 aaKnown RBP20.95■□□□□ 0.94
TOP3B-217ENST00000489581 HMGCS2P54868 508 aa20.95■□□□□ 0.94
TOP3B-217ENST00000489581 GSTO1P78417 241 aa20.95■□□□□ 0.94
TOP3B-217ENST00000489581 SPATA5Q8NB90 893 aa20.95■□□□□ 0.94
TOP3B-217ENST00000489581 ZNF280CQ8ND82 737 aa20.95■□□□□ 0.94
TOP3B-217ENST00000489581 LOC285556D6RIA3 1793 aa20.95■□□□□ 0.94
TOP3B-217ENST00000489581 MTX1Q13505 466 aa20.94■□□□□ 0.94
TOP3B-217ENST00000489581 RRP1BQ14684 758 aaKnown RBP20.94■□□□□ 0.94
TOP3B-217ENST00000489581 PAWRQ96IZ0 340 aaKnown RBP20.94■□□□□ 0.94
TOP3B-217ENST00000489581 CAP2P40123 477 aa20.93■□□□□ 0.94
TOP3B-217ENST00000489581 TEX11Q8IYF3 940 aa20.93■□□□□ 0.94
TOP3B-217ENST00000489581 CRISPLD2Q9H0B8 497 aa20.93■□□□□ 0.94
TOP3B-217ENST00000489581 USP17L5A8MUK1 530 aa20.92■□□□□ 0.94
TOP3B-217ENST00000489581 MAP4K4O95819 1239 aaPredicted RBP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 CAPN2P17655 700 aa20.92■□□□□ 0.94
TOP3B-217ENST00000489581 ARID4AP29374 1257 aaPredicted RBP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 GCLCP48506 637 aaPredicted RBP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 DIS3LQ8TF46 1054 aaKnown RBP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 ARHGAP45Q92619 1136 aa20.92■□□□□ 0.94
TOP3B-217ENST00000489581 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 ASCC2Q9H1I8 757 aaPredicted RBP20.92■□□□□ 0.94
TOP3B-217ENST00000489581 STAP2Q9UGK3 403 aa20.92■□□□□ 0.94
TOP3B-217ENST00000489581 COL2A1P02458 1487 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-217ENST00000489581 MCAMP43121 646 aa20.91■□□□□ 0.94
TOP3B-217ENST00000489581 PABPC4Q13310 644 aaKnown RBP eCLIP20.91■□□□□ 0.94
TOP3B-217ENST00000489581 SH3RF3Q8TEJ3 882 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-217ENST00000489581 TBC1D2Q9BYX2 928 aa20.91■□□□□ 0.94
TOP3B-217ENST00000489581 LRP2BPQ9P2M1 347 aa20.91■□□□□ 0.94
TOP3B-217ENST00000489581 GJD2Q9UKL4 321 aa20.91■□□□□ 0.94
TOP3B-217ENST00000489581 MYO5AQ9Y4I1 1855 aaKnown RBP20.9■□□□□ 0.94
TOP3B-217ENST00000489581 PLXNB2O15031 1838 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 HMGCRP04035 888 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 TRIM32Q13049 653 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 G3BP1Q13283 466 aaKnown RBP eCLIP20.9■□□□□ 0.94
TOP3B-217ENST00000489581 SH3D19Q5HYK7 790 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 NECAB2Q7Z6G3 386 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 CDK5RAP2Q96SN8 1893 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 SIPA1L1O43166 1804 aa20.9■□□□□ 0.94
TOP3B-217ENST00000489581 LAMA3Q16787 3333 aa20.89■□□□□ 0.94
TOP3B-217ENST00000489581 PNMA6EA0A0J9YXQ4 647 aa20.89■□□□□ 0.93
TOP3B-217ENST00000489581 AS3MTQ9HBK9 375 aa20.89■□□□□ 0.93
TOP3B-217ENST00000489581 SNRKQ9NRH2 765 aa20.89■□□□□ 0.93
TOP3B-217ENST00000489581 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
TOP3B-217ENST00000489581 TNNQ9UQP3 1299 aa20.89■□□□□ 0.93
TOP3B-217ENST00000489581 SOX1O00570 391 aaPredicted RBP20.88■□□□□ 0.93
TOP3B-217ENST00000489581 GNAI2P04899 355 aa20.88■□□□□ 0.93
TOP3B-217ENST00000489581 UQCRFS1P1P0C7P4 283 aa20.88■□□□□ 0.93
TOP3B-217ENST00000489581 NOL10Q9BSC4 688 aaKnown RBP20.88■□□□□ 0.93
TOP3B-217ENST00000489581 HMX1Q9NP08 348 aaPredicted RBP20.88■□□□□ 0.93
TOP3B-217ENST00000489581 AATFQ9NY61 560 aaKnown RBP eCLIP20.88■□□□□ 0.93
TOP3B-217ENST00000489581 PI4KBQ9UBF8 816 aa20.88■□□□□ 0.93
TOP3B-217ENST00000489581 RPTORQ8N122 1335 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 A0A1W2PPC1 479 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 PEX10O60683 326 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 IRX3P78415 501 aaPredicted RBP20.87■□□□□ 0.93
TOP3B-217ENST00000489581 MTMR2Q13614 643 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 TGFBRAP1Q8WUH2 860 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 LRCH3Q96II8 777 aa20.87■□□□□ 0.93
TOP3B-217ENST00000489581 TRIM27P14373 513 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 CYP2B6P20813 491 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 JAG1P78504 1218 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 NAA16Q6N069 864 aaPredicted RBP20.86■□□□□ 0.93
TOP3B-217ENST00000489581 MAPKAPK5Q8IW41 473 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 C7orf61Q8IZ16 206 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 P2RX7Q99572 595 aaKnown RBP20.86■□□□□ 0.93
TOP3B-217ENST00000489581 WDR18Q9BV38 432 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 DHX36Q9H2U1 1008 aaKnown RBP20.86■□□□□ 0.93
TOP3B-217ENST00000489581 TMOD4Q9NZQ9 345 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 MORF4L1Q9UBU8 362 aa20.86■□□□□ 0.93
TOP3B-217ENST00000489581 BAG3O95817 575 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 BACE1P56817 501 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 SHROOM1Q2M3G4 852 aaPredicted RBP20.85■□□□□ 0.93
TOP3B-217ENST00000489581 ANKLE1Q8NAG6 615 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 TRIB2Q92519 343 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 FRAT1Q92837 279 aaPredicted RBP20.85■□□□□ 0.93
TOP3B-217ENST00000489581 CLUAP1Q96AJ1 413 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
TOP3B-217ENST00000489581 FOCADQ5VW36 1801 aa20.85■□□□□ 0.93
TOP3B-217ENST00000489581 DDX60LQ5H9U9 1706 aaKnown RBP20.84■□□□□ 0.93
TOP3B-217ENST00000489581 IPO8O15397 1037 aaKnown RBP20.84■□□□□ 0.93
TOP3B-217ENST00000489581 ASNSP08243 561 aa20.84■□□□□ 0.93
TOP3B-217ENST00000489581 TTC39AQ5SRH9 613 aa20.84■□□□□ 0.93
TOP3B-217ENST00000489581 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
TOP3B-217ENST00000489581 DNAJC18Q9H819 358 aa20.84■□□□□ 0.93
TOP3B-217ENST00000489581 TXNRD2Q9NNW7 524 aa20.84■□□□□ 0.93
TOP3B-217ENST00000489581 BCAR3O75815 825 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms