RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CAPN2P17655 700 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 G3BP1Q13283 466 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHKB-211ENST00000489453 IRF5Q13568 498 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
CHKB-211ENST00000489453 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
CHKB-211ENST00000489453 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 TBC1D2Q9BYX2 928 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 MYH1P12882 1939 aa12.8□□□□□ -0.36
CHKB-211ENST00000489453 EVI5O60447 810 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
CHKB-211ENST00000489453 GNAI2P04899 355 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 UQCRFS1P1P0C7P4 283 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 GCLCP48506 637 aaPredicted RBP12.79□□□□□ -0.36
CHKB-211ENST00000489453 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
CHKB-211ENST00000489453 RHBDL3P58872 404 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 TREML2Q5T2D2 321 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 ZNF280CQ8ND82 737 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 DEFB118Q96PH6 123 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 LRP2BPQ9P2M1 347 aa12.79□□□□□ -0.36
CHKB-211ENST00000489453 RBM27Q9P2N5 1060 aaKnown RBP12.79□□□□□ -0.36
CHKB-211ENST00000489453 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 HMGCS2P54868 508 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 SPP2Q13103 211 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
CHKB-211ENST00000489453 MTX1Q13505 466 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 TBC1D9Q6ZT07 1266 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
CHKB-211ENST00000489453 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
CHKB-211ENST00000489453 ZBTB7BO15156 539 aaPredicted RBP12.77□□□□□ -0.37
CHKB-211ENST00000489453 BAG3O95817 575 aa12.77□□□□□ -0.37
CHKB-211ENST00000489453 PLCG2P16885 1265 aa12.77□□□□□ -0.37
CHKB-211ENST00000489453 ARID4AP29374 1257 aaPredicted RBP12.77□□□□□ -0.37
CHKB-211ENST00000489453 TTC39AQ5SRH9 613 aa12.77□□□□□ -0.37
CHKB-211ENST00000489453 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
CHKB-211ENST00000489453 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
CHKB-211ENST00000489453 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHKB-211ENST00000489453 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
CHKB-211ENST00000489453 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.37
CHKB-211ENST00000489453 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
CHKB-211ENST00000489453 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 HMGCRP04035 888 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 CAP2P40123 477 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
CHKB-211ENST00000489453 NAA16Q6N069 864 aaPredicted RBP12.76□□□□□ -0.37
CHKB-211ENST00000489453 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 CRACR2BQ8N4Y2 399 aaPredicted RBP12.76□□□□□ -0.37
CHKB-211ENST00000489453 SH3RF3Q8TEJ3 882 aaPredicted RBP12.76□□□□□ -0.37
CHKB-211ENST00000489453 ZNF384Q8TF68 577 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
CHKB-211ENST00000489453 MCAMP43121 646 aa12.75□□□□□ -0.37
CHKB-211ENST00000489453 MTMR2Q13614 643 aa12.75□□□□□ -0.37
CHKB-211ENST00000489453 CCDC158Q5M9N0 1113 aa12.75□□□□□ -0.37
CHKB-211ENST00000489453 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
CHKB-211ENST00000489453 PAWRQ96IZ0 340 aaKnown RBP12.75□□□□□ -0.37
CHKB-211ENST00000489453 ASCC2Q9H1I8 757 aaPredicted RBP12.75□□□□□ -0.37
CHKB-211ENST00000489453 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
CHKB-211ENST00000489453 PAK6Q9NQU5 681 aaPredicted RBP12.75□□□□□ -0.37
CHKB-211ENST00000489453 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHKB-211ENST00000489453 HLA-DOAP06340 250 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 ASNSP08243 561 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 TRIM27P14373 513 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 ATF7IPQ6VMQ6 1270 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 CRISPLD2Q9H0B8 497 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
CHKB-211ENST00000489453 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
CHKB-211ENST00000489453 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
CHKB-211ENST00000489453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
CHKB-211ENST00000489453 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 A0A1W2PPC1 479 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 C7orf61Q8IZ16 206 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 ANKLE1Q8NAG6 615 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
CHKB-211ENST00000489453 MYH8P13535 1937 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 FLT1P17948 1338 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 RPTORQ8N122 1335 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 BACE1P56817 501 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 RRP1BQ14684 758 aaKnown RBP12.72□□□□□ -0.37
CHKB-211ENST00000489453 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
CHKB-211ENST00000489453 WDR18Q9BV38 432 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 SAP30BPQ9UHR5 308 aaKnown RBP12.72□□□□□ -0.37
CHKB-211ENST00000489453 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
CHKB-211ENST00000489453 RANBP2P49792 3224 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms