RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 DPF3Q92784 378 aa16.43■□□□□ 0.22
LINC00173-204ENST00000489452 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00173-204ENST00000489452 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
LINC00173-204ENST00000489452 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
LINC00173-204ENST00000489452 H0YGN5 161 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
LINC00173-204ENST00000489452 ADCY3O60266 1144 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
LINC00173-204ENST00000489452 ELNP15502 786 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 FLT3LGP49771 235 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 UBXN2AP68543 259 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 POLA2Q14181 598 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
LINC00173-204ENST00000489452 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 SHISA4Q96DD7 197 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 AGTPBP1Q9UPW5 1226 aa16.42■□□□□ 0.22
LINC00173-204ENST00000489452 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 BAG3O95817 575 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 CAP2P40123 477 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 HMGCS2P54868 508 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
LINC00173-204ENST00000489452 UNC93B1Q9H1C4 597 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
LINC00173-204ENST00000489452 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
LINC00173-204ENST00000489452 USP17L5A8MUK1 530 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
LINC00173-204ENST00000489452 GJB1P08034 283 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 ZAP70P43403 619 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 MIER1Q8N108 512 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 NKX2-3Q8TAU0 364 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 GPR108Q9NPR9 543 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
LINC00173-204ENST00000489452 RLBP1P12271 317 aa16.39■□□□□ 0.21
LINC00173-204ENST00000489452 GJA8P48165 433 aa16.39■□□□□ 0.21
LINC00173-204ENST00000489452 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
LINC00173-204ENST00000489452 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
LINC00173-204ENST00000489452 TLR7Q9NYK1 1049 aaKnown RBP16.39■□□□□ 0.21
LINC00173-204ENST00000489452 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
LINC00173-204ENST00000489452 PNMA3Q9UL41 463 aa16.39■□□□□ 0.21
LINC00173-204ENST00000489452 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
LINC00173-204ENST00000489452 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 PLCG2P16885 1265 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 PPP4CP60510 307 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 DYNLL1P63167 89 aaKnown RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 JAG1P78504 1218 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 U2AF1L4Q8WU68 220 aaKnown RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 COA7Q96BR5 231 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 TRIM34Q9BYJ4 488 aa16.38■□□□□ 0.21
LINC00173-204ENST00000489452 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
LINC00173-204ENST00000489452 TFRCP02786 760 aaKnown RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 INHAP05111 366 aa16.37■□□□□ 0.21
LINC00173-204ENST00000489452 CYP7A1P22680 504 aa16.37■□□□□ 0.21
LINC00173-204ENST00000489452 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 ASCC2Q9H1I8 757 aaPredicted RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 DBNLQ9UJU6 430 aaKnown RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
LINC00173-204ENST00000489452 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
LINC00173-204ENST00000489452 RANBP2P49792 3224 aaKnown RBP16.36■□□□□ 0.21
LINC00173-204ENST00000489452 DOCK1Q14185 1865 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
LINC00173-204ENST00000489452 GDF11O95390 407 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 PABPC4Q13310 644 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00173-204ENST00000489452 FOXP4Q8IVH2 680 aaPredicted RBP16.36■□□□□ 0.21
LINC00173-204ENST00000489452 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 DEFB118Q96PH6 123 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
LINC00173-204ENST00000489452 PEX10O60683 326 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
LINC00173-204ENST00000489452 SGPL1O95470 568 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 GCLCP48506 637 aaPredicted RBP16.35■□□□□ 0.21
LINC00173-204ENST00000489452 IRF5Q13568 498 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 MTMR2Q13614 643 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 PXYLP1Q8TE99 480 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 FLT1P17948 1338 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 PHIPQ8WWQ0 1821 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
LINC00173-204ENST00000489452 MGAMO43451 1857 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 ASNSP08243 561 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 FXR1P51114 621 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00173-204ENST00000489452 BACE1P56817 501 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
LINC00173-204ENST00000489452 SH3D19Q5HYK7 790 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
LINC00173-204ENST00000489452 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms