RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 GPR162Q16538 588 aa24.62■■□□□ 1.53
SND1-214ENST00000489417 SH2B1Q9NRF2 756 aaPredicted RBP24.62■■□□□ 1.53
SND1-214ENST00000489417 TMOD2Q9NZR1 351 aa24.62■■□□□ 1.53
SND1-214ENST00000489417 ZSWIM5Q9P217 1185 aa24.62■■□□□ 1.53
SND1-214ENST00000489417 TTC6Q86TZ1 520 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 DYNLL2Q96FJ2 89 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 ZBED3Q96IU2 234 aaPredicted RBP24.61■■□□□ 1.53
SND1-214ENST00000489417 TMEM87BQ96K49 555 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 MYOZ2Q9NPC6 264 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 FAM198AQ9UFP1 575 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 SHTN1A0MZ66 631 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 PRDM1O75626 825 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 LARGE1O95461 756 aa24.61■■□□□ 1.53
SND1-214ENST00000489417 ZNF70Q9UC06 446 aaPredicted RBP24.61■■□□□ 1.53
SND1-214ENST00000489417 ENTPD3O75355 529 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 NT5C2P49902 561 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 ME3Q16798 604 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 SPDYE2Q495Y8 402 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 MICALL2Q8IY33 904 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 GPC2Q8N158 579 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 MTA3Q9BTC8 594 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 GPHNQ9NQX3 736 aaPredicted RBP24.6■■□□□ 1.53
SND1-214ENST00000489417 FOXD4L1Q9NU39 408 aa24.6■■□□□ 1.53
SND1-214ENST00000489417 SH2B2O14492 632 aaPredicted RBP24.59■■□□□ 1.53
SND1-214ENST00000489417 RANBP6O60518 1105 aaKnown RBP24.59■■□□□ 1.53
SND1-214ENST00000489417 APOBRQ0VD83 1088 aa24.59■■□□□ 1.53
SND1-214ENST00000489417 C9orf131Q5VYM1 1079 aa24.59■■□□□ 1.53
SND1-214ENST00000489417 C16orf86Q6ZW13 317 aa24.59■■□□□ 1.53
SND1-214ENST00000489417 ZNF287Q9HBT7 754 aa24.59■■□□□ 1.53
SND1-214ENST00000489417 CNOT7Q9UIV1 285 aaKnown RBP24.59■■□□□ 1.53
SND1-214ENST00000489417 ANGEL1Q9UNK9 670 aaKnown RBP24.59■■□□□ 1.53
SND1-214ENST00000489417 CLRN2A0PK11 232 aa24.58■■□□□ 1.53
SND1-214ENST00000489417 HLA-DOAP06340 250 aa24.58■■□□□ 1.53
SND1-214ENST00000489417 TCP10Q12799 353 aa24.58■■□□□ 1.53
SND1-214ENST00000489417 ZFPM1Q8IX07 1006 aa24.58■■□□□ 1.53
SND1-214ENST00000489417 SLKQ9H2G2 1235 aaPredicted RBP24.58■■□□□ 1.53
SND1-214ENST00000489417 MKNK2Q9HBH9 465 aa24.58■■□□□ 1.53
SND1-214ENST00000489417 COL2A1P02458 1487 aaPredicted RBP24.57■■□□□ 1.52
SND1-214ENST00000489417 IFIT3O14879 490 aaKnown RBP24.57■■□□□ 1.52
SND1-214ENST00000489417 MYO1BO43795 1136 aa24.57■■□□□ 1.52
SND1-214ENST00000489417 SART3Q15020 963 aaKnown RBP24.57■■□□□ 1.52
SND1-214ENST00000489417 TMEM67Q5HYA8 995 aa24.57■■□□□ 1.52
SND1-214ENST00000489417 IGDCC4Q8TDY8 1250 aa24.57■■□□□ 1.52
SND1-214ENST00000489417 DHX36Q9H2U1 1008 aaKnown RBP24.57■■□□□ 1.52
SND1-214ENST00000489417 WNT10BO00744 389 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 GRIN3BO60391 1043 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 CDK8P49336 464 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 EVCP57679 992 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 SLC44A5Q8NCS7 719 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 INTS4Q96HW7 963 aaKnown RBP24.56■■□□□ 1.52
SND1-214ENST00000489417 UBAC1Q9BSL1 405 aa24.56■■□□□ 1.52
SND1-214ENST00000489417 GOLGB1Q14789 3259 aaKnown RBP24.56■■□□□ 1.52
SND1-214ENST00000489417 GABPAQ06546 454 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 NBPF9Q3BBW0 867 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 FKBP1CQ5VVH2 108 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 CCDC83Q8IWF9 413 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 ZKSCAN3Q9BRR0 538 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 EHD4Q9H223 541 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 LY9Q9HBG7 655 aa24.55■■□□□ 1.52
SND1-214ENST00000489417 ERICH2A1L162 156 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 TSPY2A6NKD2 308 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 TCP10L2B9ZVM9 353 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 H7C1D1 291 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 RASA1P20936 1047 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 LIFRP42702 1097 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
SND1-214ENST00000489417 IQCA1Q86XH1 822 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 ZSCAN29Q8IWY8 852 aaPredicted RBP24.54■■□□□ 1.52
SND1-214ENST00000489417 ZNF444Q8N0Y2 327 aaPredicted RBP24.54■■□□□ 1.52
SND1-214ENST00000489417 NECAB1Q8N987 351 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 ZNF274Q96GC6 653 aaPredicted RBP24.54■■□□□ 1.52
SND1-214ENST00000489417 VEZTQ9HBM0 779 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 SERPINB13Q9UIV8 391 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 ATRNL1Q5VV63 1379 aa24.54■■□□□ 1.52
SND1-214ENST00000489417 KLF18A0A0U1RQI7 1052 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 DDTLA6NHG4 134 aaPredicted RBP24.53■■□□□ 1.52
SND1-214ENST00000489417 PFKFB2O60825 505 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 EGFRP00533 1210 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 ST3GAL1Q11201 340 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 STK3Q13188 491 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 WTAPQ15007 396 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 SH3BP5LQ7L8J4 393 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 SAMD7Q7Z3H4 446 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 ZSCAN10Q96SZ4 725 aaPredicted RBP24.53■■□□□ 1.52
SND1-214ENST00000489417 GPRC5DQ9NZD1 345 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 SWAP70Q9UH65 585 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 BRPF3Q9ULD4 1205 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 NAP1L2Q9ULW6 460 aaPredicted RBP24.53■■□□□ 1.52
SND1-214ENST00000489417 TNKSO95271 1327 aa24.53■■□□□ 1.52
SND1-214ENST00000489417 TFAP4Q01664 338 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 KIF4BQ2VIQ3 1234 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 TBC1D10BQ4KMP7 808 aaPredicted RBP24.52■■□□□ 1.52
SND1-214ENST00000489417 NFXL1Q6ZNB6 911 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 SGMS1Q86VZ5 419 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 FAM151AQ8WW52 585 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 GTF3C6Q969F1 213 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 SENP2Q9HC62 589 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 TAOK2Q9UL54 1235 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 CNTNAP1P78357 1384 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms