RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 KBTBD13C9JR72 458 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 CTNND1O60716 968 aaKnown RBP14.63□□□□□ -0.07
HDAC6-233ENST00000489352 GPR37L1O60883 481 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-233ENST00000489352 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-233ENST00000489352 CCL14Q16627 93 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 ARRDC4Q8NCT1 418 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 ASCC2Q9H1I8 757 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-233ENST00000489352 DDX20Q9UHI6 824 aaKnown RBP14.63□□□□□ -0.07
HDAC6-233ENST00000489352 XIRP2A4UGR9 3374 aa14.63□□□□□ -0.07
HDAC6-233ENST00000489352 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 MAPK4P31152 587 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-233ENST00000489352 SKIV2LQ15477 1246 aaKnown RBP14.62□□□□□ -0.07
HDAC6-233ENST00000489352 TRIM60Q495X7 471 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 GPRC5AQ8NFJ5 357 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 ZNF594Q96JF6 807 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-233ENST00000489352 STK31Q9BXU1 1019 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 SPINK5Q9NQ38 1064 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-233ENST00000489352 PDLIM7Q9NR12 457 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 MORF4L1Q9UBU8 362 aa14.62□□□□□ -0.07
HDAC6-233ENST00000489352 MYBBP1AQ9BQG0 1328 aaKnown RBP14.62□□□□□ -0.07
HDAC6-233ENST00000489352 RAG1P15918 1043 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 FPGSQ05932 587 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 NFIAQ12857 509 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 GJC2Q5T442 439 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-233ENST00000489352 CDC42EP5Q6NZY7 148 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 APBA2Q99767 749 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 USP40Q9NVE5 1235 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 TACC3Q9Y6A5 838 aa14.61□□□□□ -0.07
HDAC6-233ENST00000489352 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 TRIM43BA6NCK2 446 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 FAM86C2PA6NEL3 165 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 SMIM22K7EJ46 135 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 HMGCS2P54868 508 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 SPP2Q13103 211 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 SH3RF1Q7Z6J0 888 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 CCDC146Q8IYE0 955 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 MICALL1Q8N3F8 863 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 TRIM43Q96BQ3 446 aaPredicted RBP14.6□□□□□ -0.07
HDAC6-233ENST00000489352 PCGF6Q9BYE7 350 aa14.6□□□□□ -0.07
HDAC6-233ENST00000489352 TFF2Q03403 129 aa14.59□□□□□ -0.07
HDAC6-233ENST00000489352 LMBR1LQ6UX01 489 aa14.59□□□□□ -0.07
HDAC6-233ENST00000489352 FBXO33Q7Z6M2 555 aa14.59□□□□□ -0.07
HDAC6-233ENST00000489352 CCDC84Q86UT8 332 aaPredicted RBP14.59□□□□□ -0.07
HDAC6-233ENST00000489352 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
HDAC6-233ENST00000489352 GLRX3O76003 335 aaKnown RBP14.58□□□□□ -0.08
HDAC6-233ENST00000489352 KCNQ1P51787 676 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 CASP7P55210 303 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 PLEKHH3Q7Z736 793 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 ZNF280CQ8ND82 737 aa14.58□□□□□ -0.08
HDAC6-233ENST00000489352 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
HDAC6-233ENST00000489352 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.58□□□□□ -0.08
HDAC6-233ENST00000489352 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 CLTBP09497 229 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 EPHB4P54760 987 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 FOXO4P98177 505 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 CCDC174Q6PII3 467 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 ZFPM1Q8IX07 1006 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 UIMC1Q96RL1 719 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 TBC1D2Q9BYX2 928 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 MSRAQ9UJ68 235 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 DAGLAQ9Y4D2 1042 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 UTYO14607 1347 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 REV3LO60673 3130 aa14.57□□□□□ -0.08
HDAC6-233ENST00000489352 RGS3P49796 1198 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 GNAI1P63096 354 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 TLE2Q04725 743 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 MAP2K5Q13163 448 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 ADGRE1Q14246 886 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 WDR66Q8TBY9 1149 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 USP6NLQ92738 828 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 FERMT2Q96AC1 680 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 PBX4Q9BYU1 374 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 TMOD4Q9NZQ9 345 aa14.56□□□□□ -0.08
HDAC6-233ENST00000489352 ENTPD3O75355 529 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 PBX2P40425 430 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 ADCYAP1R1P41586 468 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
HDAC6-233ENST00000489352 MORN1Q5T089 497 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 WDR78Q5VTH9 848 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 C8orf58Q8NAV2 365 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 LINS1Q8NG48 757 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 PAGR1Q9BTK6 254 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 SLC28A3Q9HAS3 691 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC6-233ENST00000489352 MROH5Q6ZUA9 1318 aa14.55□□□□□ -0.08
HDAC6-233ENST00000489352 HERVK_113P62684 666 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 ERVK-9P63128 1117 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 ERVK-24P63145 666 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 NHLH1Q02575 133 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 SNX17Q15036 470 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 RAB30Q15771 203 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 CSPP1Q1MSJ5 1256 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms