RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 MROH7-TTC4A0A0A0MT08 1334 aa13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 SLF2Q8IX21 1173 aa13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 AGTPBP1Q9UPW5 1226 aa13.4□□□□□ -0.26
PTP4A2-206ENST00000489313 LOC285556D6RIA3 1793 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 SOX1O00570 391 aaPredicted RBP13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 RHBDL3P58872 404 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 MECOMQ03112 1051 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 SPTY2D1Q68D10 685 aaPredicted RBP13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 ZNF384Q8TF68 577 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 COA7Q96BR5 231 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 PAWRQ96IZ0 340 aaKnown RBP13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 COPRSQ9NQ92 184 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
PTP4A2-206ENST00000489313 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 SPP2Q13103 211 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 LRCH3Q96II8 777 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 MEIS3Q99687 375 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
PTP4A2-206ENST00000489313 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 ZBTB22O15209 634 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 TFCP2Q12800 502 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 FAM110CQ1W6H9 321 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 PNMA3Q9UL41 463 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 TBC1D12O60347 775 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 HMGCS2P54868 508 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 PROCA1Q8NCQ7 364 aaPredicted RBP13.37□□□□□ -0.27
PTP4A2-206ENST00000489313 PLXNB2O15031 1838 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 A0A1W2PPC1 479 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 TRIM32Q13049 653 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 NECAB2Q7Z6G3 386 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 ZNF280CQ8ND82 737 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 HMG20BQ9P0W2 317 aa13.36□□□□□ -0.27
PTP4A2-206ENST00000489313 SRGAP3O43295 1099 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 HMGCRP04035 888 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 C7orf61Q8IZ16 206 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 NEUROD6Q96NK8 337 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 API5Q9BZZ5 524 aaKnown RBP13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 OSBPL5Q9H0X9 879 aaPredicted RBP13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 AKAP2Q9Y2D5 859 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 EYSQ5T1H1 3165 aa13.35□□□□□ -0.27
PTP4A2-206ENST00000489313 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 CAPN2P17655 700 aa13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 GCLCP48506 637 aaPredicted RBP13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 SPATA5Q8NB90 893 aa13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 NSUN4Q96CB9 384 aaKnown RBP13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 RAI14Q9P0K7 980 aa13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 GJD2Q9UKL4 321 aa13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 ZMYND8Q9ULU4 1186 aaPredicted RBP13.34□□□□□ -0.27
PTP4A2-206ENST00000489313 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 PEX10O60683 326 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 LDHCP07864 332 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 CAP2P40123 477 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 GSTO1P78417 241 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 PABPC4Q13310 644 aaKnown RBP eCLIP13.33□□□□□ -0.288e-10■□□□□ 8.6
PTP4A2-206ENST00000489313 GORABQ5T7V8 394 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 COL2A1P02458 1487 aaPredicted RBP13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 CDK5RAP2Q96SN8 1893 aa13.33□□□□□ -0.28
PTP4A2-206ENST00000489313 DLL1O00548 723 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 SH3RF3Q8TEJ3 882 aaPredicted RBP13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 GDF15Q99988 308 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 HMX1Q9NP08 348 aaPredicted RBP13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 PRUNE2Q8WUY3 3088 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 RPTORQ8N122 1335 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 SYN1P17600 705 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 SH3D19Q5HYK7 790 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 TRIB2Q92519 343 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 NBPF3Q9H094 633 aa13.32□□□□□ -0.28
PTP4A2-206ENST00000489313 MYO5AQ9Y4I1 1855 aaKnown RBP13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 MAP4K4O95819 1239 aaPredicted RBP13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 GNAI3P08754 354 aa13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 CYP2B6P20813 491 aa13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 KCNA4P22459 653 aa13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 MCAMP43121 646 aa13.31□□□□□ -0.28
PTP4A2-206ENST00000489313 IRX3P78415 501 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms