RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-213	ENST00000489215	CDK5RAP2	Q96SN8	1893 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	TRIM34	Q9BYJ4	488 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	TBC1D2	Q9BYX2	928 aa		29.07	■■■□□ 2.24
PTPN18-213	ENST00000489215	PTPRA	P18433	802 aa		29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	TAF1C	Q15572	869 aa	Predicted RBP	29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	GCC1	Q96CN9	775 aa		29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	ABHD8	Q96I13	439 aa		29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	MCOLN1	Q9GZU1	580 aa		29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	ZHX2	Q9Y6X8	837 aa		29.05	■■■□□ 2.24
PTPN18-213	ENST00000489215	ZNF532	Q9HCE3	1301 aa		29.04	■■■□□ 2.24
PTPN18-213	ENST00000489215	CRHR2	Q13324	411 aa		29.04	■■■□□ 2.24
PTPN18-213	ENST00000489215	HDAC1	Q13547	482 aa	Predicted RBP	29.04	■■■□□ 2.24
PTPN18-213	ENST00000489215	CRNKL1	Q9BZJ0	848 aa	Known RBP	29.04	■■■□□ 2.24
PTPN18-213	ENST00000489215	DOCK1	Q14185	1865 aa		29.04	■■■□□ 2.24
PTPN18-213	ENST00000489215	FASTKD5	Q7L8L6	764 aa	Known RBP	29.03	■■■□□ 2.24
PTPN18-213	ENST00000489215	TTC6	Q86TZ1	520 aa		29.03	■■■□□ 2.24
PTPN18-213	ENST00000489215	METTL16	Q86W50	562 aa	Known RBP	29.03	■■■□□ 2.24
PTPN18-213	ENST00000489215	RIOK1	Q9BRS2	568 aa	Known RBP	29.03	■■■□□ 2.24
PTPN18-213	ENST00000489215	GINM1	Q9NU53	330 aa		29.03	■■■□□ 2.24
PTPN18-213	ENST00000489215	TTC41P	Q6P2S7	1318 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	ERC2	O15083	957 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	CAP2	P40123	477 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	ANKRD23	Q86SG2	305 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	FAM43A	Q8N2R8	423 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	ERO1A	Q96HE7	468 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	PALD1	Q9ULE6	856 aa		29.02	■■■□□ 2.24
PTPN18-213	ENST00000489215	MYH1	P12882	1939 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	BTBD19	C9JJ37	291 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	ADD2	P35612	726 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	ARHGEF6	Q15052	776 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	UBE3C	Q15386	1083 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	R3HDML	Q9H3Y0	253 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	AFG3L2	Q9Y4W6	797 aa		29.01	■■■□□ 2.23
PTPN18-213	ENST00000489215	TCRBV5S4A2T	A0A5A2	114 aa		29	■■■□□ 2.23
PTPN18-213	ENST00000489215	LRRFIP1	Q32MZ4	808 aa	Known RBP	29	■■■□□ 2.23
PTPN18-213	ENST00000489215	EDC3	Q96F86	508 aa	Known RBP	29	■■■□□ 2.23
PTPN18-213	ENST00000489215	SP3	Q02447	781 aa		28.99	■■■□□ 2.23
PTPN18-213	ENST00000489215	EHD4	Q9H223	541 aa		28.99	■■■□□ 2.23
PTPN18-213	ENST00000489215	AS3MT	Q9HBK9	375 aa		28.99	■■■□□ 2.23
PTPN18-213	ENST00000489215	FAM196B	A6NMK8	535 aa		28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215	ASNS	P08243	561 aa		28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215	RWDD1	Q9H446	243 aa	Predicted RBP	28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215	SAP30BP	Q9UHR5	308 aa	Known RBP	28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215	TAOK2	Q9UL54	1235 aa		28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215	MYH7	P12883	1935 aa		28.98	■■■□□ 2.23
PTPN18-213	ENST00000489215		A0A0G2JLL6	359 aa	Predicted RBP	28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	USP17L5	A8MUK1	530 aa		28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	TLR2	O60603	784 aa		28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	CAPN15	O75808	1086 aa		28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	PRRT2	Q7Z6L0	340 aa	Predicted RBP	28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	SERPINB13	Q9UIV8	391 aa		28.97	■■■□□ 2.23
PTPN18-213	ENST00000489215	GLRX3	O76003	335 aa	Known RBP	28.96	■■■□□ 2.23
PTPN18-213	ENST00000489215	SLURP2	P0DP57	97 aa		28.96	■■■□□ 2.23
PTPN18-213	ENST00000489215	ANKRD45	Q5TZF3	282 aa		28.96	■■■□□ 2.23
PTPN18-213	ENST00000489215	SLC45A1	Q9Y2W3	748 aa		28.96	■■■□□ 2.23
PTPN18-213	ENST00000489215	ATAD5	Q96QE3	1844 aa		28.95	■■■□□ 2.23
PTPN18-213	ENST00000489215	PDHX	O00330	501 aa		28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	POLR3D	P05423	398 aa	Predicted RBP	28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	KBTBD3	Q8NAB2	608 aa		28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	ZNF280C	Q8ND82	737 aa		28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	DDRGK1	Q96HY6	314 aa		28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	ATP8A2	Q9NTI2	1148 aa		28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.95	■■■□□ 2.22
PTPN18-213	ENST00000489215	ZFY	P08048	801 aa	Predicted RBP	28.94	■■■□□ 2.22
PTPN18-213	ENST00000489215	SIPA1L1	O43166	1804 aa		28.94	■■■□□ 2.22
PTPN18-213	ENST00000489215	PHIP	Q8WWQ0	1821 aa		28.94	■■■□□ 2.22
PTPN18-213	ENST00000489215	TRIM75P	A6NK02	468 aa		28.93	■■■□□ 2.22
PTPN18-213	ENST00000489215	AMOTL1	Q8IY63	956 aa		28.93	■■■□□ 2.22
PTPN18-213	ENST00000489215	PARK7	Q99497	189 aa	Known RBP	28.93	■■■□□ 2.22
PTPN18-213	ENST00000489215	MX1	P20591	662 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	MOGS	Q13724	837 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	KIF22	Q14807	665 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	FBXO46	Q6PJ61	603 aa	Predicted RBP	28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	LCORL	Q8N3X6	602 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	PROCA1	Q8NCQ7	364 aa	Predicted RBP	28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	WDR18	Q9BV38	432 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	MCM9	Q9NXL9	1143 aa		28.92	■■■□□ 2.22
PTPN18-213	ENST00000489215	CCDC85C	A6NKD9	419 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	MBD4	O95243	580 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	SPP2	Q13103	211 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	TATDN1	Q6P1N9	297 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	GADL1	Q6ZQY3	521 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	DNAJC18	Q9H819	358 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	ARMT1	Q9H993	441 aa		28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.91	■■■□□ 2.22
PTPN18-213	ENST00000489215	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.9	■■■□□ 2.22
PTPN18-213	ENST00000489215	GPAT2	Q6NUI2	795 aa		28.9	■■■□□ 2.22
PTPN18-213	ENST00000489215	TRIM17	Q9Y577	477 aa		28.9	■■■□□ 2.22
PTPN18-213	ENST00000489215	PTPRF	P10586	1907 aa		28.9	■■■□□ 2.22
PTPN18-213	ENST00000489215	NAV1	Q8NEY1	1877 aa		28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	RRP1B	Q14684	758 aa	Known RBP	28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	SDR42E1	Q8WUS8	393 aa		28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	EFCC1	Q9HA90	598 aa		28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	PNMA3	Q9UL41	463 aa		28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	AGTPBP1	Q9UPW5	1226 aa		28.89	■■■□□ 2.22
PTPN18-213	ENST00000489215	C19orf81	C9J6K1	198 aa		28.88	■■■□□ 2.21
PTPN18-213	ENST00000489215	RNF113A	O15541	343 aa	Known RBP	28.88	■■■□□ 2.21
PTPN18-213	ENST00000489215	GNRH1	P01148	92 aa		28.88	■■■□□ 2.21
PTPN18-213	ENST00000489215	SLC4A8	Q2Y0W8	1093 aa		28.88	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms