RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
USP11-209ENST00000488848 PGAP2Q9UHJ9 254 aa12.65□□□□□ -0.38
USP11-209ENST00000488848 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
USP11-209ENST00000488848 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 MYH8P13535 1937 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 AK2P54819 239 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 ESR2Q92731 530 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 ZSCAN31Q96LW9 406 aaPredicted RBP12.64□□□□□ -0.39
USP11-209ENST00000488848 RNF181Q9P0P0 153 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
USP11-209ENST00000488848 LIMCH1Q9UPQ0 1083 aa12.64□□□□□ -0.39
USP11-209ENST00000488848 MYO1BO43795 1136 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 TBC1D12O60347 775 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 PLCD1P51178 756 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 IGDCC4Q8TDY8 1250 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 TMOD2Q9NZR1 351 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
USP11-209ENST00000488848 ANGEL1Q9UNK9 670 aaKnown RBP12.63□□□□□ -0.39
USP11-209ENST00000488848 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
USP11-209ENST00000488848 SH2B2O14492 632 aaPredicted RBP12.62□□□□□ -0.39
USP11-209ENST00000488848 PRC1O43663 620 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 CYP2D6P10635 497 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 DDIT3P35638 169 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 SEC23AQ15436 765 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
USP11-209ENST00000488848 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
USP11-209ENST00000488848 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
USP11-209ENST00000488848 PI4KBQ9UBF8 816 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 HERC5Q9UII4 1024 aaKnown RBP12.62□□□□□ -0.39
USP11-209ENST00000488848 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 PPP2R3BQ9Y5P8 575 aa12.62□□□□□ -0.39
USP11-209ENST00000488848 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 H7C1D1 291 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 RASA1P20936 1047 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP11-209ENST00000488848 GPR162Q16538 588 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 CHMP4CQ96CF2 233 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 ADARB2Q9NS39 739 aaKnown RBP12.61□□□□□ -0.39
USP11-209ENST00000488848 ZSWIM5Q9P217 1185 aa12.61□□□□□ -0.39
USP11-209ENST00000488848 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 B4E1Z4 1266 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 SMIM22K7EJ46 135 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 KDM4AO75164 1064 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 POLR3DP05423 398 aaPredicted RBP12.6□□□□□ -0.39
USP11-209ENST00000488848 CPA1P15085 419 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 SHMT1P34896 483 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 CDK8P49336 464 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
USP11-209ENST00000488848 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 Q6ZUG5 572 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
USP11-209ENST00000488848 RGS22Q8NE09 1264 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 ZC3H15Q8WU90 426 aaKnown RBP12.6□□□□□ -0.39
USP11-209ENST00000488848 CCDC17Q96LX7 622 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 TEPSINQ96N21 525 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 DNAJC18Q9H819 358 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 LY9Q9HBG7 655 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 SYNPO2Q9UMS6 1093 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
USP11-209ENST00000488848 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 DDTLA6NHG4 134 aaPredicted RBP12.59□□□□□ -0.39
USP11-209ENST00000488848 PFKFB2O60825 505 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 EGFRP00533 1210 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 TNNI2P48788 182 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 EVX2Q03828 476 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 IQCA1Q86XH1 822 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 ZFPM1Q8IX07 1006 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
USP11-209ENST00000488848 MAP3K14Q99558 947 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 TPCN1Q9ULQ1 816 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
USP11-209ENST00000488848 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
USP11-209ENST00000488848 PICALMQ13492 652 aa12.58□□□□□ -0.4
USP11-209ENST00000488848 ME3Q16798 604 aa12.58□□□□□ -0.4
USP11-209ENST00000488848 RCSD1Q6JBY9 416 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms