RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CEP170BQ9Y4F5 1589 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 AGPSO00116 658 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 ZNF185O15231 689 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 SARNPP82979 210 aaKnown RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 NAA16Q6N069 864 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 A0A0G2JS52 829 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 EME2A4GXA9 379 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-229ENST00000488765 CASP14P31944 242 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 SEC24CP53992 1094 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 PSMB7Q99436 277 aa18.34■□□□□ 0.53
MCF2L-229ENST00000488765 AKR1B15C9JRZ8 316 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-229ENST00000488765 IKBKBO14920 756 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 CASP1P29466 404 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 IFT88Q13099 833 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 PPFIBP1Q86W92 1011 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 IQCA1Q86XH1 822 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 IP6K1Q92551 441 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 NAPGQ99747 312 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-229ENST00000488765 BPIFA3Q9BQP9 254 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 GBP3Q9H0R5 595 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.53
MCF2L-229ENST00000488765 ZNF330Q9Y3S2 320 aaPredicted RBP18.33■□□□□ 0.53
MCF2L-229ENST00000488765 COL15A1P39059 1388 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 GOLGA6BA6NDN3 693 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 SASH1O94885 1247 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 MYO6Q9UM54 1294 aa18.33■□□□□ 0.52
MCF2L-229ENST00000488765 RGPD8O14715 1765 aaPredicted RBP18.33■□□□□ 0.52
MCF2L-229ENST00000488765 POTEB2H3BUK9 544 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 CCT6AP40227 531 aaKnown RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 SLC7A5Q01650 507 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 TBC1D31Q96DN5 1066 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 RIMS1Q86UR5 1692 aaKnown RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 UPP2O95045 317 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 MYBL1P10243 752 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 ATF3P18847 181 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 MAP2K1Q02750 393 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 ARL8AQ96BM9 186 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 MYO1BO43795 1136 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 EZH2Q15910 746 aaKnown RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 SMYD4Q8IYR2 804 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-229ENST00000488765 SELENOOQ9BVL4 669 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
MCF2L-229ENST00000488765 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 SETD1AO15047 1707 aaKnown RBP18.31■□□□□ 0.52
MCF2L-229ENST00000488765 CRB1P82279 1406 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 GUCY1A3Q02108 690 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 MYSM1Q5VVJ2 828 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 KLC4Q9NSK0 619 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 APBA1Q02410 837 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 CEP85LQ5SZL2 805 aa18.31■□□□□ 0.52
MCF2L-229ENST00000488765 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
MCF2L-229ENST00000488765 HOOK1Q9UJC3 728 aaKnown RBP18.31■□□□□ 0.52
MCF2L-229ENST00000488765 ENO4A6NNW6 628 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 PDIA3P30101 505 aaKnown RBP18.3■□□□□ 0.52
MCF2L-229ENST00000488765 TBX2Q13207 712 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-229ENST00000488765 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 HDAC7Q8WUI4 952 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 MCM8Q9UJA3 840 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 PES1O00541 588 aaKnown RBP18.3■□□□□ 0.52
MCF2L-229ENST00000488765 HSP90AB4PQ58FF6 505 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
MCF2L-229ENST00000488765 EIF3HO15372 352 aaKnown RBP eCLIP18.29■□□□□ 0.524e-7■□□□□ 9.5
MCF2L-229ENST00000488765 PPARAQ07869 468 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
MCF2L-229ENST00000488765 CARMIL3Q8ND23 1372 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 MAP3K5Q99683 1374 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 RNF225M0QZC1 329 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-229ENST00000488765 CHUKO15111 745 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 GCKP35557 465 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 FXR1P51114 621 aaKnown RBP eCLIP18.29■□□□□ 0.52
MCF2L-229ENST00000488765 C2orf54Q08AI8 447 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
MCF2L-229ENST00000488765 SNX1Q13596 522 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 TRIM6Q9C030 488 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-229ENST00000488765 KIF9Q9HAQ2 790 aa18.29■□□□□ 0.52
MCF2L-229ENST00000488765 KRT14P02533 472 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 FNTAP49354 379 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 PIP4K2BP78356 416 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 SMARCAL1Q9NZC9 954 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 A0A1W2PQ27 194 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 A0A1W2PQ64 194 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 A0A1W2PQD8 194 aa18.28■□□□□ 0.52
MCF2L-229ENST00000488765 AP1G2O75843 785 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms