RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DNAJC18Q9H819 358 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 MYO5AQ9Y4I1 1855 aaKnown RBP19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
CTDSP1-209ENST00000488627 IGHDP01880 384 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 UBE3CQ15386 1083 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 ANKRD45Q5TZF3 282 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 OTUD7BQ6GQQ9 843 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 ZNF296Q8WUU4 475 aaPredicted RBP19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 ZHX2Q9Y6X8 837 aa19.31■□□□□ 0.68
CTDSP1-209ENST00000488627 TTC41PQ6P2S7 1318 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 BTBD19C9JJ37 291 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 CXCL11O14625 94 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 CAP2P40123 477 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 USP5P45974 858 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 CRHR2Q13324 411 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 LCORLQ8N3X6 602 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 PICK1Q9NRD5 415 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 AFG3L2Q9Y4W6 797 aa19.3■□□□□ 0.68
CTDSP1-209ENST00000488627 JAG1P78504 1218 aa19.29■□□□□ 0.68
CTDSP1-209ENST00000488627 CCDC84Q86UT8 332 aaPredicted RBP19.29■□□□□ 0.68
CTDSP1-209ENST00000488627 KBTBD3Q8NAB2 608 aa19.29■□□□□ 0.68
CTDSP1-209ENST00000488627 DOCK2Q92608 1830 aa19.29■□□□□ 0.68
CTDSP1-209ENST00000488627 CRNKL1Q9BZJ0 848 aaKnown RBP19.28■□□□□ 0.68
CTDSP1-209ENST00000488627 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
CTDSP1-209ENST00000488627 ARMT1Q9H993 441 aa19.28■□□□□ 0.68
CTDSP1-209ENST00000488627 GLRX3O76003 335 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 HLA-DOAP06340 250 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 MX1P20591 662 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 PLCD1P51178 756 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 SLC4A8Q2Y0W8 1093 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 GPAT2Q6NUI2 795 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 SDR42E1Q8WUS8 393 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 MCOLN1Q9GZU1 580 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 PUS7LQ9H0K6 701 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 DCP1AQ9NPI6 582 aaPredicted RBP19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
CTDSP1-209ENST00000488627 CASP8AP2Q9UKL3 1982 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 A0A0G2JLL6 359 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 ERC2O15083 957 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 PRKAB2O43741 272 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 FKTNO75072 461 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 MBD4O95243 580 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 SHROOM1Q2M3G4 852 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 PRRT2Q7Z6L0 340 aaPredicted RBP19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 ANKRD23Q86SG2 305 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 EHD4Q9H223 541 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 LAMB1P07942 1786 aa19.26■□□□□ 0.67
CTDSP1-209ENST00000488627 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 EVX2Q03828 476 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 GABPAQ06546 454 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 DGKZQ13574 1117 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 TAF1CQ15572 869 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 TTC6Q86TZ1 520 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
CTDSP1-209ENST00000488627 PDE1AP54750 535 aa19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 IRX6P78412 446 aaPredicted RBP19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 TATDN1Q6P1N9 297 aa19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 CTU1Q7Z7A3 348 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 OSBP2Q969R2 916 aa19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 ABHD8Q96I13 439 aa19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 ZFYVE28Q9HCC9 887 aa19.24■□□□□ 0.67
CTDSP1-209ENST00000488627 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 CAP1Q01518 475 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 NUCB1Q02818 461 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 SPP2Q13103 211 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 STRBPQ96SI9 672 aaKnown RBP19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
CTDSP1-209ENST00000488627 PDHXO00330 501 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 TLR2O60603 784 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 ASNSP08243 561 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 CYP2D6P10635 497 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 FASTKD5Q7L8L6 764 aaKnown RBP19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 ZNF280CQ8ND82 737 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 APPBP2Q92624 585 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 TBC1D2Q9BYX2 928 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 ATP8A2Q9NTI2 1148 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 GINM1Q9NU53 330 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 SIPA1L1O43166 1804 aa19.22■□□□□ 0.67
CTDSP1-209ENST00000488627 GDF11O95390 407 aa19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 ZFYP08048 801 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 SHMT1P34896 483 aa19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 SP3Q02447 781 aa19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 B4GALNT3Q6L9W6 998 aa19.21■□□□□ 0.67
CTDSP1-209ENST00000488627 CHD1LQ86WJ1 897 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms