RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 ZBTB39O15060 712 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 RPS6KA4O75676 772 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 GYS1P13807 737 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 DPEP1P16444 411 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 EIF1AXP47813 144 aaKnown RBP8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 CTBSQ01459 385 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 FAM26DQ5JW98 314 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 PIK3R5Q8WYR1 880 aa8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
TNFSF4-203ENST00000488053 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 HMOX1P09601 288 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 IL13P35225 146 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 CRKLP46109 303 aaKnown RBP8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 SPEM2Q0P670 501 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 ARHGAP27Q6ZUM4 889 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 NLGN1Q8N2Q7 840 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 CCDC87Q9NVE4 849 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 PLEKHG2Q9H7P9 1386 aa8.56□□□□□ -1.04
TNFSF4-203ENST00000488053 WIPF1O43516 503 aa8.55□□□□□ -1.04
TNFSF4-203ENST00000488053 PCSK2P16519 638 aa8.55□□□□□ -1.04
TNFSF4-203ENST00000488053 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
TNFSF4-203ENST00000488053 LGR6Q9HBX8 967 aa8.55□□□□□ -1.04
TNFSF4-203ENST00000488053 AVENQ9NQS1 362 aaPredicted RBP8.55□□□□□ -1.04
TNFSF4-203ENST00000488053 C2CD2LO14523 706 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 TGFB2P61812 414 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 SLC39A6Q13433 755 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 AAMPQ13685 434 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 CC2D1BQ5T0F9 858 aaKnown RBP8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 DNAJC10Q8IXB1 793 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 GPR152Q8TDT2 470 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 KIF7Q2M1P5 1343 aa8.54□□□□□ -1.04
TNFSF4-203ENST00000488053 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 ARAFP10398 606 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 HSPA6P17066 643 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 MZF1P28698 734 aaPredicted RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 DDR1Q08345 913 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 CCINQ13939 588 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 ZNF468Q5VIY5 522 aaPredicted RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 INTS5Q6P9B9 1019 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 ATCAYQ86WG3 371 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 FNDC3AQ9Y2H6 1198 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 USP42Q9H9J4 1324 aaKnown RBP8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
TNFSF4-203ENST00000488053 AFDNP55196 1824 aaKnown RBP8.52□□□□□ -1.04
TNFSF4-203ENST00000488053 RNMTO43148 476 aaKnown RBP8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 EGFRP00533 1210 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 KCNA3P22001 575 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 CHRNA5P30532 468 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 MTHFSDQ2M296 383 aaKnown RBP8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 PNMA5Q96PV4 448 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 SLC30A3Q99726 388 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 OXCT2Q9BYC2 517 aaPredicted RBP8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 GSX2Q9BZM3 304 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 SLC52A2Q9HAB3 445 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 GDF2Q9UK05 429 aaPredicted RBP8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
TNFSF4-203ENST00000488053 XYLBO75191 536 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 ADH6P28332 368 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 USP5P45974 858 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 ARHGAP4P98171 946 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 DNM1Q05193 864 aaKnown RBP8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 GRIN2CQ14957 1233 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 DALRD3Q5D0E6 543 aaKnown RBP8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 GOLGA6L1Q8N7Z2 621 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 TTC16Q8NEE8 873 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 EDEM1Q92611 657 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 NMRK2Q9NPI5 230 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 PIM2Q9P1W9 311 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 BIN2Q9UBW5 565 aaPredicted RBP8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 ZBTB1Q9Y2K1 713 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 SOS1Q07889 1333 aaPredicted RBP8.51□□□□□ -1.05
TNFSF4-203ENST00000488053 KCPQ6ZWJ8 1503 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 POLRMTO00411 1230 aaKnown RBP8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 DIAPH1O60610 1272 aaKnown RBP8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 SBF1O95248 1867 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 PDGFAP04085 211 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 CANXP27824 592 aaKnown RBP8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 ECM1Q16610 540 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 MRC1P22897 1456 aa8.5□□□□□ -1.05
TNFSF4-203ENST00000488053 COL15A1P39059 1388 aa8.49□□□□□ -1.05
TNFSF4-203ENST00000488053 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
TNFSF4-203ENST00000488053 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
TNFSF4-203ENST00000488053 NDUFB5O43674 189 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms