RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 BNIP3Q12983 259 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 HP1BP3Q5SSJ5 553 aaPredicted RBP5.18□□□□□ -1.58
HFM1-208ENST00000488023 LRRC56Q8IYG6 542 aaPredicted RBP5.18□□□□□ -1.58
HFM1-208ENST00000488023 DDX54Q8TDD1 881 aaKnown RBP5.18□□□□□ -1.58
HFM1-208ENST00000488023 PIF1Q9H611 641 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 CCSER2Q9H7U1 834 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 MRS2Q9HD23 443 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 RAD18Q9NS91 495 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.18□□□□□ -1.588e-6■■■■□ 21.4
HFM1-208ENST00000488023 ATP2B1P20020 1258 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 ASPAP45381 313 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 GRIA4P48058 902 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 PTPN12Q05209 780 aaKnown RBP5.18□□□□□ -1.58
HFM1-208ENST00000488023 SPRED3Q2MJR0 410 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 RNF34Q969K3 372 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 CCDC74AQ96AQ1 378 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 TGIF2Q9GZN2 237 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 NPHS2Q9NP85 383 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 TRAK1Q9UPV9 953 aa5.18□□□□□ -1.58
HFM1-208ENST00000488023 TMA7Q9Y2S6 64 aaKnown RBP5.18□□□□□ -1.58
HFM1-208ENST00000488023 SBNO2Q9Y2G9 1366 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 PNMA6FA0A0J9YX94 578 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 TLDC2A0PJX2 215 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 SORBS3O60504 671 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 ZSCAN22P10073 491 aaPredicted RBP5.17□□□□□ -1.58
HFM1-208ENST00000488023 ITPKAP23677 461 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 DNAJA1P31689 397 aaKnown RBP5.17□□□□□ -1.58
HFM1-208ENST00000488023 PRPF40BQ6NWY9 871 aaKnown RBP5.17□□□□□ -1.58
HFM1-208ENST00000488023 TMC4Q7Z404 712 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 PMFBP1Q8TBY8 1022 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 MISP3Q96FF7 219 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 LGR6Q9HBX8 967 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 VTI1BQ9UEU0 232 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 AP4E1Q9UPM8 1137 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 DAGLAQ9Y4D2 1042 aa5.17□□□□□ -1.58
HFM1-208ENST00000488023 TTBK1Q5TCY1 1321 aaPredicted RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 GADD45BO75293 160 aaPredicted RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 PRPF40AO75400 957 aaKnown RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 ECEL1O95672 775 aa5.16□□□□□ -1.58
HFM1-208ENST00000488023 FUT4P22083 530 aa5.16□□□□□ -1.58
HFM1-208ENST00000488023 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 SLC43A3Q8NBI5 491 aa5.16□□□□□ -1.58
HFM1-208ENST00000488023 FBF1Q8TES7 1133 aa5.16□□□□□ -1.58
HFM1-208ENST00000488023 TRIM56Q9BRZ2 755 aaKnown RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 RC3H2Q9HBD1 1191 aaKnown RBP5.16□□□□□ -1.58
HFM1-208ENST00000488023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.16□□□□□ -1.58
HFM1-208ENST00000488023 RNASE1P07998 156 aaKnown RBP5.15□□□□□ -1.58
HFM1-208ENST00000488023 ZNF76P36508 570 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 DAB2P98082 770 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 PSMD2Q13200 908 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 CYP27C1Q4G0S4 372 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 PI16Q6UXB8 463 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 EPS8L3Q8TE67 593 aaKnown RBP5.15□□□□□ -1.58
HFM1-208ENST00000488023 GPATCH3Q96I76 525 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 CORO1BQ9BR76 489 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 ZNF576Q9H609 170 aa5.15□□□□□ -1.58
HFM1-208ENST00000488023 MBNL3Q9NUK0 354 aaKnown RBP5.15□□□□□ -1.58
HFM1-208ENST00000488023 TMEM238LA0A1B0GVL6 79 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 MARCH6O60337 910 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 AOC2O75106 756 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 B3GALT4O96024 378 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 CD8BP10966 210 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 ALG1LQ6GMV1 187 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 PLD6Q8N2A8 252 aaKnown RBP5.15□□□□□ -1.59
HFM1-208ENST00000488023 NLGN1Q8N2Q7 840 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 METTL5Q9NRN9 209 aaKnown RBP5.15□□□□□ -1.59
HFM1-208ENST00000488023 PPP4R2Q9NY27 417 aa5.15□□□□□ -1.59
HFM1-208ENST00000488023 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.15□□□□□ -1.59
HFM1-208ENST00000488023 LRRC10BA6NIK2 292 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 TSPAN15O95858 294 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 EGFLAMQ63HQ2 1017 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 SDE2Q6IQ49 451 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 NETO1Q8TDF5 533 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 OSBPL7Q9BZF2 842 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 ZSWIM4Q9H7M6 989 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 NLRP2Q9NX02 1062 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 ADAMTS6Q9UKP5 1117 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 VAV3Q9UKW4 847 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 PPP1R9AQ9ULJ8 1098 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 TBX22Q9Y458 520 aa5.14□□□□□ -1.59
HFM1-208ENST00000488023 ARID4BQ4LE39 1312 aaPredicted RBP5.13□□□□□ -1.59
HFM1-208ENST00000488023 SYNGAP1Q96PV0 1343 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 RAB11FIP3O75154 756 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 FAM87AP0C7U9 286 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 AP3B2Q13367 1082 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 GRM2Q14416 872 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.13□□□□□ -1.592e-25■■■□□ 17.4
HFM1-208ENST00000488023 ZNF394Q53GI3 561 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 PI4K2BQ8TCG2 481 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 GMLQ99445 158 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 WDR18Q9BV38 432 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 PCDHGB7Q9Y5F8 929 aa5.13□□□□□ -1.59
HFM1-208ENST00000488023 XRCC5P13010 732 aaKnown RBP5.12□□□□□ -1.59
HFM1-208ENST00000488023 PRKCQQ04759 706 aa5.12□□□□□ -1.59
HFM1-208ENST00000488023 NOL8Q76FK4 1167 aaKnown RBP5.12□□□□□ -1.59
HFM1-208ENST00000488023 LRRN4CLQ8ND94 238 aa5.12□□□□□ -1.59
HFM1-208ENST00000488023 MICAL1Q8TDZ2 1067 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms