RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 ITGA6P23229 1130 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 PDE6BP35913 854 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 USP4Q13107 963 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
GARNL3-218ENST00000487565 CDC5LQ99459 802 aaKnown RBP9.46□□□□□ -0.9
GARNL3-218ENST00000487565 SPON1Q9HCB6 807 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 ANKRD31Q8N7Z5 1873 aa9.46□□□□□ -0.9
GARNL3-218ENST00000487565 CDC14CA4D256 554 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 CRY2Q49AN0 593 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 HSP90AB4PQ58FF6 505 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 DDX46Q7L014 1031 aaKnown RBP9.45□□□□□ -0.9
GARNL3-218ENST00000487565 ERC1Q8IUD2 1116 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 GCC1Q96CN9 775 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 RBM17Q96I25 401 aaKnown RBP9.45□□□□□ -0.9
GARNL3-218ENST00000487565 SIL1Q9H173 461 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 PA2G4Q9UQ80 394 aaKnown RBP9.45□□□□□ -0.9
GARNL3-218ENST00000487565 EXOC6BQ9Y2D4 811 aa9.45□□□□□ -0.9
GARNL3-218ENST00000487565 SURF6O75683 361 aaKnown RBP9.44□□□□□ -0.9
GARNL3-218ENST00000487565 IGHDP01880 384 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 NPR1P16066 1061 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
GARNL3-218ENST00000487565 RFX5P48382 616 aaPredicted RBP9.44□□□□□ -0.9
GARNL3-218ENST00000487565 C2CD5Q86YS7 1000 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 ANKRD18AQ8IVF6 992 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 COPRSQ9NQ92 184 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
GARNL3-218ENST00000487565 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 H0YIN7 160 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 EYA2O00167 538 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 CIAO1O76071 339 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 PTPN12Q05209 780 aaKnown RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 GRAPQ13588 217 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 SMC5Q8IY18 1101 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 VWA5B2Q8N398 1253 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 GRAPLQ8TC17 118 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 NANOS1Q8WY41 292 aaKnown RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 CNKSR1Q969H4 720 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 ZNF594Q96JF6 807 aaPredicted RBP9.43□□□□□ -0.9
GARNL3-218ENST00000487565 MPHOSPH8Q99549 860 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 CNNM1Q9NRU3 951 aa9.43□□□□□ -0.9
GARNL3-218ENST00000487565 KIF13BQ9NQT8 1826 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 COL4A1P02462 1669 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 RAB11FIP3O75154 756 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 SRGNP10124 158 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-218ENST00000487565 IL15P40933 162 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-218ENST00000487565 POU4F2Q12837 409 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 MAP7D1Q3KQU3 841 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 STYK1Q6J9G0 422 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 LDHAL6AQ6ZMR3 332 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 ZSCAN1Q8NBB4 408 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 PLPP7Q8NBV4 271 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 KIF1BPQ96EK5 621 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 MASTLQ96GX5 879 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 CRAMP1Q96RY5 1269 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 LRRCC1Q9C099 1032 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-218ENST00000487565 NOP58Q9Y2X3 529 aaKnown RBP9.42□□□□□ -0.9
GARNL3-218ENST00000487565 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 DLEC1Q9Y238 1755 aa9.42□□□□□ -0.9
GARNL3-218ENST00000487565 ZNF609O15014 1411 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 IL2RAP01589 272 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 CHRNA5P30532 468 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 METTL24Q5JXM2 366 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 TMC4Q7Z404 712 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 CELF1Q92879 486 aaKnown RBP9.41□□□□□ -0.9
GARNL3-218ENST00000487565 ZNF622Q969S3 477 aaKnown RBP eCLIP9.41□□□□□ -0.9
GARNL3-218ENST00000487565 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 LRRC37AA6NMS7 1700 aa9.41□□□□□ -0.9
GARNL3-218ENST00000487565 KIAA1551Q9HCM1 1747 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 MROH5Q6ZUA9 1318 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 RPS8P62241 208 aaKnown RBP9.4□□□□□ -0.9
GARNL3-218ENST00000487565 CENPCQ03188 943 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 PRPF40BQ6NWY9 871 aaKnown RBP9.4□□□□□ -0.9
GARNL3-218ENST00000487565 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
GARNL3-218ENST00000487565 BCL11AQ9H165 835 aa9.4□□□□□ -0.9
GARNL3-218ENST00000487565 BSDC1Q9NW68 430 aaPredicted RBP9.4□□□□□ -0.9
GARNL3-218ENST00000487565 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 SMARCA5O60264 1052 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-218ENST00000487565 DPEP1P16444 411 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 ALDH1B1P30837 517 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 TGFB2P61812 414 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 NUCB1Q02818 461 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 TFCP2Q12800 502 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
GARNL3-218ENST00000487565 CLASRPQ8N2M8 674 aaKnown RBP9.39□□□□□ -0.91
GARNL3-218ENST00000487565 XAGE2Q96GT9 111 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms