RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 CTU1Q7Z7A3 348 aaKnown RBP12.44□□□□□ -0.42
RNF220-215ENST00000487332 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
RNF220-215ENST00000487332 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
RNF220-215ENST00000487332 BOLA2Q9H3K6 86 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF220-215ENST00000487332 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
RNF220-215ENST00000487332 LOC285556D6RIA3 1793 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 A0A0G2JLL6 359 aaPredicted RBP12.43□□□□□ -0.42
RNF220-215ENST00000487332 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
RNF220-215ENST00000487332 CAP2P40123 477 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 CRHR2Q13324 411 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 PRRT2Q7Z6L0 340 aaPredicted RBP12.43□□□□□ -0.42
RNF220-215ENST00000487332 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
RNF220-215ENST00000487332 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
RNF220-215ENST00000487332 BTBD19C9JJ37 291 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 ERC2O15083 957 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 USP5P45974 858 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 MOGSQ13724 837 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 FASTKD5Q7L8L6 764 aaKnown RBP12.42□□□□□ -0.42
RNF220-215ENST00000487332 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 ABHD8Q96I13 439 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
RNF220-215ENST00000487332 ATAD5Q96QE3 1844 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 ADGRA2Q96PE1 1338 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 MYH7P12883 1935 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 TLR2O60603 784 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
RNF220-215ENST00000487332 ASNSP08243 561 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 DGKZQ13574 1117 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
RNF220-215ENST00000487332 TTC6Q86TZ1 520 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
RNF220-215ENST00000487332 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
RNF220-215ENST00000487332 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
RNF220-215ENST00000487332 ZFYP08048 801 aaPredicted RBP12.4□□□□□ -0.42
RNF220-215ENST00000487332 MX1P20591 662 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.42
RNF220-215ENST00000487332 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 TATDN1Q6P1N9 297 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 SMC5Q8IY18 1101 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
RNF220-215ENST00000487332 PI4K2BQ8TCG2 481 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
RNF220-215ENST00000487332 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 SERPINB13Q9UIV8 391 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 ZHX2Q9Y6X8 837 aa12.4□□□□□ -0.42
RNF220-215ENST00000487332 PTPRFP10586 1907 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 FAM196BA6NMK8 535 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 SP3Q02447 781 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 GABPAQ06546 454 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
RNF220-215ENST00000487332 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 FBXO46Q6PJ61 603 aaPredicted RBP12.39□□□□□ -0.43
RNF220-215ENST00000487332 LCORLQ8N3X6 602 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 DCP1AQ9NPI6 582 aaPredicted RBP12.39□□□□□ -0.43
RNF220-215ENST00000487332 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
RNF220-215ENST00000487332 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 MYH1P12882 1939 aa12.39□□□□□ -0.43
RNF220-215ENST00000487332 PDHXO00330 501 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 MBD4O95243 580 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 C17orf99Q6UX52 265 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 APPBP2Q92624 585 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 RWDD1Q9H446 243 aaPredicted RBP12.38□□□□□ -0.43
RNF220-215ENST00000487332 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
RNF220-215ENST00000487332 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
RNF220-215ENST00000487332 GNRH1P01148 92 aa12.37□□□□□ -0.43
RNF220-215ENST00000487332 ARMT1Q9H993 441 aa12.37□□□□□ -0.43
RNF220-215ENST00000487332 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
RNF220-215ENST00000487332 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
RNF220-215ENST00000487332 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 C19orf81C9J6K1 198 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 GNAT2P19087 354 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 SHMT1P34896 483 aa12.36□□□□□ -0.43
RNF220-215ENST00000487332 PLCD1P51178 756 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms