RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 SEC23AQ15436 765 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 RTN1Q16799 776 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 BRAPQ7Z569 592 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 ZNF654Q8IZM8 581 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 FSIP1Q8NA03 581 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 ESR2Q92731 530 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 PLCB2Q00722 1185 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 SSRP1Q08945 709 aaKnown RBP26.32■■□□□ 1.8
LRRC1-203ENST00000487251 DCP1AQ9NPI6 582 aaPredicted RBP26.32■■□□□ 1.8
LRRC1-203ENST00000487251 XDHP47989 1333 aa26.32■■□□□ 1.8
LRRC1-203ENST00000487251 ANO6Q4KMQ2 910 aa26.31■■□□□ 1.8
LRRC1-203ENST00000487251 DZIP1Q86YF9 867 aaKnown RBP26.31■■□□□ 1.8
LRRC1-203ENST00000487251 ENAHQ8N8S7 591 aaPredicted RBP26.31■■□□□ 1.8
LRRC1-203ENST00000487251 FMNL1O95466 1100 aaPredicted RBP26.3■■□□□ 1.8
LRRC1-203ENST00000487251 ADCY5O95622 1261 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 IFNAR1P17181 557 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 SLC27A3Q5K4L6 730 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 LEMD3Q9Y2U8 911 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 KIAA1551Q9HCM1 1747 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 A0A1B0GVL5 298 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 ENGASEQ8NFI3 743 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 POLR3EQ9NVU0 708 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 NID2Q14112 1375 aa26.3■■□□□ 1.8
LRRC1-203ENST00000487251 ST5P78524 1137 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 CRY2Q49AN0 593 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 CCDC73Q6ZRK6 1079 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 CRNKL1Q9BZJ0 848 aaKnown RBP26.29■■□□□ 1.8
LRRC1-203ENST00000487251 A0A087WWV3 80 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 SF3A1Q15459 793 aaKnown RBP26.29■■□□□ 1.8
LRRC1-203ENST00000487251 DIXDC1Q155Q3 683 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 NBPF11Q86T75 865 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 LUZP1Q86V48 1076 aa26.29■■□□□ 1.8
LRRC1-203ENST00000487251 ERCC4Q92889 916 aaPredicted RBP26.29■■□□□ 1.8
LRRC1-203ENST00000487251 ANO1Q5XXA6 986 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 FANCBQ8NB91 859 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 TDRD7Q8NHU6 1098 aaKnown RBP26.28■■□□□ 1.8
LRRC1-203ENST00000487251 ZSCAN10Q96SZ4 725 aaPredicted RBP26.28■■□□□ 1.8
LRRC1-203ENST00000487251 KCNJ14Q9UNX9 436 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.28■■□□□ 1.8
LRRC1-203ENST00000487251 SPTLC2O15270 562 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 NMT2O60551 498 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 TXNRD1Q16881 649 aa26.28■■□□□ 1.8
LRRC1-203ENST00000487251 UFL1O94874 794 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 GNL2Q13823 731 aaKnown RBP26.27■■□□□ 1.8
LRRC1-203ENST00000487251 STK36Q9NRP7 1315 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 GOLGB1Q14789 3259 aaKnown RBP26.27■■□□□ 1.8
LRRC1-203ENST00000487251 DLEC1Q9Y238 1755 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 BAZ2BQ9UIF8 2168 aaKnown RBP26.27■■□□□ 1.8
LRRC1-203ENST00000487251 MARCKSP29966 332 aaPredicted RBP26.27■■□□□ 1.8
LRRC1-203ENST00000487251 FAM160A1Q05DH4 1040 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 FAM47AQ5JRC9 791 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 ADALQ6DHV7 355 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 FAM200AQ8TCP9 573 aa26.27■■□□□ 1.8
LRRC1-203ENST00000487251 YEATS4O95619 227 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 LDHBP07195 334 aaKnown RBP26.26■■□□□ 1.79
LRRC1-203ENST00000487251 NDUFA8P51970 172 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 TRIM29Q14134 588 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 TMTC2Q8N394 836 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 DNAJC25Q9H1X3 360 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 POLRMTO00411 1230 aaKnown RBP26.26■■□□□ 1.79
LRRC1-203ENST00000487251 USP17L8P0C7I0 530 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 CRACR2BQ8N4Y2 399 aaPredicted RBP26.26■■□□□ 1.79
LRRC1-203ENST00000487251 MRPS27Q92552 414 aaKnown RBP26.26■■□□□ 1.79
LRRC1-203ENST00000487251 CBX8Q9HC52 389 aa26.26■■□□□ 1.79
LRRC1-203ENST00000487251 KLHL34Q8N239 644 aa26.25■■□□□ 1.79
LRRC1-203ENST00000487251 KCNG4Q8TDN1 519 aa26.25■■□□□ 1.79
LRRC1-203ENST00000487251 MTA3Q9BTC8 594 aa26.25■■□□□ 1.79
LRRC1-203ENST00000487251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.25■■□□□ 1.79
LRRC1-203ENST00000487251 PTMAP06454 111 aaKnown RBP26.25■■□□□ 1.79
LRRC1-203ENST00000487251 FGRP09769 529 aa26.25■■□□□ 1.79
LRRC1-203ENST00000487251 IFIT1BQ5T764 474 aaKnown RBP26.25■■□□□ 1.79
LRRC1-203ENST00000487251 ZNF804AQ7Z570 1209 aa26.25■■□□□ 1.79
LRRC1-203ENST00000487251 MTERF4Q7Z6M4 381 aaKnown RBP26.25■■□□□ 1.79
LRRC1-203ENST00000487251 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.25■■□□□ 1.79
LRRC1-203ENST00000487251 hCG_1642624A0A1W2PR95 340 aa26.24■■□□□ 1.79
LRRC1-203ENST00000487251 KINO60870 393 aaKnown RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 FMR1NBQ8N0W7 255 aaPredicted RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 SH3RF3Q8TEJ3 882 aaPredicted RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
LRRC1-203ENST00000487251 WDHD1O75717 1129 aaPredicted RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 SPTY2D1Q68D10 685 aaPredicted RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 WDR66Q8TBY9 1149 aa26.24■■□□□ 1.79
LRRC1-203ENST00000487251 RBM17Q96I25 401 aaKnown RBP26.24■■□□□ 1.79
LRRC1-203ENST00000487251 ATP8A2Q9NTI2 1148 aa26.24■■□□□ 1.79
LRRC1-203ENST00000487251 BTBD18B2RXH4 712 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 U2AF2P26368 475 aaKnown RBP eCLIP26.23■■□□□ 1.791e-9■■■□□ 14.6
LRRC1-203ENST00000487251 KIAA2012Q0VF49 1180 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 ZNF827Q17R98 1081 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 TRIM22Q8IYM9 498 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 PRDM10Q9NQV6 1147 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 ANKRD31Q8N7Z5 1873 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 MROH7-TTC4A0A0A0MT08 1334 aa26.23■■□□□ 1.79
LRRC1-203ENST00000487251 SMAP1Q8IYB5 467 aaPredicted RBP26.23■■□□□ 1.79
LRRC1-203ENST00000487251 AXDND1Q5T1B0 1012 aaPredicted RBP26.22■■□□□ 1.79
LRRC1-203ENST00000487251 SHISA4Q96DD7 197 aa26.22■■□□□ 1.79
LRRC1-203ENST00000487251 CD209Q9NNX6 404 aa26.22■■□□□ 1.79
LRRC1-203ENST00000487251 CDK5RAP2Q96SN8 1893 aa26.22■■□□□ 1.79
LRRC1-203ENST00000487251 PLEKHA8P1O95397 391 aa26.22■■□□□ 1.79
LRRC1-203ENST00000487251 IQCA1Q86XH1 822 aa26.22■■□□□ 1.79
LRRC1-203ENST00000487251 POLLQ9UGP5 575 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms