RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 IGHMBP2P38935 993 aaKnown RBP8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 VEGFBP49765 207 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 HIRAP54198 1017 aaPredicted RBP8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 FOXC1Q12948 553 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 GRM1Q13255 1194 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 TBC1D10BQ4KMP7 808 aaPredicted RBP8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 SLC4A10Q6U841 1118 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 GLIS2Q9BZE0 524 aaPredicted RBP8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ZNF408Q9H9D4 720 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 CHMP3Q9Y3E7 222 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 ZNF521Q96K83 1311 aa8.18□□□□□ -1.1
SOX2-OT-210ENST00000487240 CACNA1FO60840 1977 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L15C9J2P7 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L10C9JJH3 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L13C9JLJ4 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L11C9JVI0 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L21D6R901 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L18D6R9N7 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L22D6RA61 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L17D6RBQ6 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L19D6RCP7 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L20D6RJB6 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 EGFRP00533 1210 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 GRM5P41594 1212 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 ATP1A2P50993 1020 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 CASP7P55210 303 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP17L24Q0WX57 530 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 BEND3Q5T5X7 828 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 BSDC1Q9NW68 430 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 USTQ9Y2C2 406 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 SCN9AQ15858 1988 aa8.17□□□□□ -1.1
SOX2-OT-210ENST00000487240 ANKRD18BA2A2Z9 1011 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 CELF2O95319 508 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 CSF1RP07333 972 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 RPS12P25398 132 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 GTF2IP78347 998 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP4Q13107 963 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 NR5A1Q13285 461 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 ELOAQ14241 798 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 DEFB115Q30KQ5 88 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 CRTC2Q53ET0 693 aaPredicted RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 COL13A1Q5TAT6 717 aaPredicted RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 CST9Q5W186 159 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 DPF2Q92785 391 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 TRAIPQ9BWF2 469 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 PLA2G12BQ9BX93 195 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 DNAAF2Q9NVR5 837 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 C9orf78Q9NZ63 289 aaPredicted RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
SOX2-OT-210ENST00000487240 MED23Q9ULK4 1368 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 ASTN2O75129 1339 aaPredicted RBP8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 RASSF10A6NK89 507 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 E9PSI1 815 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 GRM8O00222 908 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 MYCP01106 439 aaPredicted RBP8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 VIL1P09327 827 aaKnown RBP8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 KLRK1P26718 216 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 KCNJ4P48050 445 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 FOXO4P98177 505 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 PTK7Q13308 1070 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 TAF7LQ5H9L4 462 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 EPHA10Q5JZY3 1008 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 CYP4F22Q6NT55 531 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 LMBR1LQ6UX01 489 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 CDC37L1Q7L3B6 337 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 MXD3Q9BW11 206 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 ANKRD2Q9GZV1 360 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 PGAP2Q9UHJ9 254 aa8.15□□□□□ -1.1
SOX2-OT-210ENST00000487240 TRPM7Q96QT4 1865 aa8.15□□□□□ -1.11
SOX2-OT-210ENST00000487240 ZNF804BA4D1E1 1349 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 WDR33Q9C0J8 1336 aaKnown RBP8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 SNAP23O00161 211 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 PLIN1O60240 522 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 TAF5LO75529 589 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 CLDN10P78369 228 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 CHRNDQ07001 517 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 SLFN5Q08AF3 891 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 KRT26Q7Z3Y9 468 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 SSH1Q8WYL5 1049 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 DCPSQ96C86 337 aaKnown RBP8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 CAPNS2Q96L46 248 aa8.14□□□□□ -1.11
SOX2-OT-210ENST00000487240 GGA3Q9NZ52 723 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms