RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 RLFQ13129 1914 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 PEX10O60683 326 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 BCAR3O75815 825 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 PDE8BO95263 885 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 GNAI3P08754 354 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 TRIM27P14373 513 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 CAPN2P17655 700 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 HIBADHP31937 336 aaKnown RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 RFX5P48382 616 aaPredicted RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 TNFAIP1Q13829 316 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 LHX8Q68G74 356 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 ATF7IPQ6VMQ6 1270 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 VGLL2Q8N8G2 317 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 KLHDC4Q8TBB5 520 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 PPM1EQ8WY54 764 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 TRIB2Q92519 343 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 FRAT1Q92837 279 aaPredicted RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 FAM84BQ96KN1 310 aaPredicted RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 MEIS3Q99687 375 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 LRFN3Q9BTN0 628 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 FRMD4AQ9P2Q2 1039 aaPredicted RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 ZNF112Q9UJU3 913 aa8□□□□□ -1.13
CTDSPL-208ENST00000486978 LRRFIP2Q9Y608 721 aaKnown RBP8□□□□□ -1.13
CTDSPL-208ENST00000486978 PIEZO1Q92508 2521 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 MUC6Q6W4X9 2439 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 EYA2O00167 538 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 GYG1P46976 350 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 PUM3Q15397 648 aaKnown RBP7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 CAVIN4Q5BKX8 364 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 POTEEQ6S8J3 1075 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 TDRD7Q8NHU6 1098 aaKnown RBP7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 PARK7Q99497 189 aaKnown RBP7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 EPHX3Q9H6B9 360 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 HMX1Q9NP08 348 aaPredicted RBP7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 FBXO3Q9UK99 471 aa7.99□□□□□ -1.13
CTDSPL-208ENST00000486978 PLXNA1Q9UIW2 1896 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 CIAO1O76071 339 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 HMGCRP04035 888 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 IFIT1P09914 478 aaKnown RBP7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 FGFR2P21802 821 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 CCND3P30281 292 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 MFSD14BQ5SR56 506 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 MAP3K21Q5TCX8 1036 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 ZKSCAN2Q63HK3 967 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 ATG9AQ7Z3C6 839 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 VPS37DQ86XT2 251 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 ANKRD13CQ8N6S4 541 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 CLUAP1Q96AJ1 413 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 ASB2Q96Q27 587 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 UHRF1Q96T88 793 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 ZNF341Q9BYN7 854 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 TNNQ9UQP3 1299 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 TRIOO75962 3097 aa7.98□□□□□ -1.13
CTDSPL-208ENST00000486978 A0A0G2JLL6 359 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 FRAT2O75474 233 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 SLC5A1P13866 664 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 ITGB8P26012 769 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 TNNI2P48788 182 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 ATN1P54259 1190 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 EPHB4P54760 987 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 SMAD3P84022 425 aaKnown RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 CACNB2Q08289 660 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 MTX1Q13505 466 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 TREML2Q5T2D2 321 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 APOBEC3HQ6NTF7 200 aaKnown RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 GADL1Q6ZQY3 521 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 PRRT2Q7Z6L0 340 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 ZFPM1Q8IX07 1006 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 LPIN2Q92539 896 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 KHSRPQ92945 711 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 SENP6Q9GZR1 1112 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 SIL1Q9H173 461 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 C11orf16Q9NQ32 467 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 COPRSQ9NQ92 184 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 CEP126Q9P2H0 1117 aa7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 PA2G4Q9UQ80 394 aaKnown RBP7.97□□□□□ -1.13
CTDSPL-208ENST00000486978 PHF20L1A8MW92 1017 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 SRGAP3O43295 1099 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 GNAI2P04899 355 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 IL15P40933 162 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 CHAF1AQ13111 956 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 CCDC85BQ15834 202 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 ATP2B3Q16720 1220 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 TBC1D22AQ8WUA7 517 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 BADQ92934 168 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 COA7Q96BR5 231 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 LBHD1Q9BQE6 289 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 IQSEC3Q9UPP2 1182 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 AFG3L2Q9Y4W6 797 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 C5orf42Q9H799 3197 aa7.96□□□□□ -1.14
CTDSPL-208ENST00000486978 CXCL11O14625 94 aa7.95□□□□□ -1.14
CTDSPL-208ENST00000486978 CYP2B6P20813 491 aa7.95□□□□□ -1.14
CTDSPL-208ENST00000486978 TCP10Q12799 353 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms