RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 DACT2Q5SW24 774 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 INCENPQ9NQS7 918 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 PIM2Q9P1W9 311 aa11.2□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L21D6R901 530 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 PRC1O43663 620 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 ADCY5O95622 1261 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 PDIA3P30101 505 aaKnown RBP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 TDO2P48775 406 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 SH3RF3Q8TEJ3 882 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 BRF1Q92994 677 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 CHAMP1Q96JM3 812 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 LRRC2Q9BYS8 371 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 DDX19AQ9NUU7 478 aaKnown RBP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
POLR1A-208ENST00000486964 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 NEDD4P46934 1319 aa11.19□□□□□ -0.62
POLR1A-208ENST00000486964 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 ORC4O43929 436 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 ECE2O60344 883 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 LIFRP42702 1097 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 HDLBPQ00341 1268 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SOGA3Q5TF21 947 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 C12orf60Q5U649 245 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 CHST3Q7LGC8 479 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 GTF3C6Q969F1 213 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 FUCA2Q9BTY2 467 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 KRT23Q9C075 422 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 RNF41Q9H4P4 317 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SPTLC3Q9NUV7 552 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 DAGLAQ9Y4D2 1042 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 DLEC1Q9Y238 1755 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 GOLGA6L4A6NEF3 574 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 B4E1Z4 1266 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SH2B2O14492 632 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 PLCG2P16885 1265 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 BTDP43251 543 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 NT5C2P49902 561 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 TRDNQ13061 729 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 MAP3K11Q16584 847 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 AOC3Q16853 763 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 APOBEC3HQ6NTF7 200 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 RALYLQ86SE5 291 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SGMS1Q86VZ5 419 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 SP7Q8TDD2 431 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 NUP62CLQ9H1M0 184 aa11.18□□□□□ -0.62
POLR1A-208ENST00000486964 ARPP21Q9UBL0 812 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-208ENST00000486964 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 CYP2D7A0A087X1C5 515 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 CTDNEP1O95476 244 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 GTF2F1P35269 517 aaKnown RBP eCLIP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 EVX2Q03828 476 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 DNM1Q05193 864 aaKnown RBP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 SCRN1Q12765 414 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 GMLQ99445 158 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
POLR1A-208ENST00000486964 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
POLR1A-208ENST00000486964 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
POLR1A-208ENST00000486964 MINDY4BA8MYZ0 360 aa11.16□□□□□ -0.62
POLR1A-208ENST00000486964 VIL1P09327 827 aaKnown RBP11.16□□□□□ -0.62
POLR1A-208ENST00000486964 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
POLR1A-208ENST00000486964 CYP2D6P10635 497 aa11.16□□□□□ -0.62
POLR1A-208ENST00000486964 NOLC1Q14978 699 aaKnown RBP eCLIP11.16□□□□□ -0.62
POLR1A-208ENST00000486964 SEC23AQ15436 765 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms