RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 JAG1P78504 1218 aa17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 TRIM32Q13049 653 aa17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 SPP2Q13103 211 aa17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 DZIP1Q86YF9 867 aaKnown RBP17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 SMCR8Q8TEV9 937 aaPredicted RBP17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 NSUN4Q96CB9 384 aaKnown RBP17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 GDF15Q99988 308 aa17.71■□□□□ 0.43
SDCCAG3-211ENST00000486441 A0A1W2PPC1 479 aa17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 EVI5O60447 810 aa17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 CAPN2P17655 700 aa17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 MTX1Q13505 466 aa17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 TBC1D9Q6ZT07 1266 aa17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
SDCCAG3-211ENST00000486441 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 PEX10O60683 326 aa17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 SH3D19Q5HYK7 790 aa17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 SPTY2D1Q68D10 685 aaPredicted RBP17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 COA7Q96BR5 231 aa17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 OSBPL5Q9H0X9 879 aaPredicted RBP17.69■□□□□ 0.42
SDCCAG3-211ENST00000486441 CAP2P40123 477 aa17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 HMGCS2P54868 508 aa17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 POTEEQ6S8J3 1075 aa17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 SLF2Q8IX21 1173 aa17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 ASCC2Q9H1I8 757 aaPredicted RBP17.68■□□□□ 0.42
SDCCAG3-211ENST00000486441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.427e-10■■■□□ 15.6
SDCCAG3-211ENST00000486441 COL2A1P02458 1487 aaPredicted RBP17.67■□□□□ 0.42
SDCCAG3-211ENST00000486441 PLXNB2O15031 1838 aa17.67■□□□□ 0.42
SDCCAG3-211ENST00000486441 UNC80Q8N2C7 3258 aa17.67■□□□□ 0.42
SDCCAG3-211ENST00000486441 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 BMP8BP34820 402 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 GCLCP48506 637 aaPredicted RBP17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 SHROOM1Q2M3G4 852 aaPredicted RBP17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 MAP3K21Q5TCX8 1036 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 NECAB2Q7Z6G3 386 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 SPATA5Q8NB90 893 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 API5Q9BZZ5 524 aaKnown RBP17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 MORF4L1Q9UBU8 362 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
SDCCAG3-211ENST00000486441 SRGAP3O43295 1099 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 HMGCRP04035 888 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 MCAMP43121 646 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 MVPQ14764 893 aaKnown RBP17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 METTL16Q86W50 562 aaKnown RBP17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 ANKLE1Q8NAG6 615 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 TRIB2Q92519 343 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 P2RX7Q99572 595 aaKnown RBP17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 WDR18Q9BV38 432 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 DNAJC18Q9H819 358 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 TXNRD2Q9NNW7 524 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 PNMA3Q9UL41 463 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 OGDHLQ9ULD0 1010 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 RPTORQ8N122 1335 aa17.65■□□□□ 0.42
SDCCAG3-211ENST00000486441 SIPA1L1O43166 1804 aa17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 USP17L5A8MUK1 530 aa17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 CT47B1P0C2W7 299 aaPredicted RBP17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 SH3RF3Q8TEJ3 882 aaPredicted RBP17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 USP6NLQ92738 828 aa17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 NEUROD6Q96NK8 337 aa17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
SDCCAG3-211ENST00000486441 LDHCP07864 332 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 HOXA7P31268 230 aaPredicted RBP17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 Q3C1V9 767 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 ADGRA1Q86SQ6 560 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 SLC17A8Q8NDX2 589 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 RBPJLQ9UBG7 517 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 ZMYND8Q9ULU4 1186 aaPredicted RBP17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
SDCCAG3-211ENST00000486441 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 DLL1O00548 723 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 BACE1P56817 501 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 PPP4CP60510 307 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 TEX11Q8IYF3 940 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 PFASO15067 1338 aa17.62■□□□□ 0.41
SDCCAG3-211ENST00000486441 GSTO1P78417 241 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 NBPF3Q9H094 633 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 PI4KBQ9UBF8 816 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 VCANP13611 3396 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 ATAD5Q96QE3 1844 aa17.61■□□□□ 0.41
SDCCAG3-211ENST00000486441 GNAI3P08754 354 aa17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 COL6A1P12109 1028 aa17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 CYP2B6P20813 491 aa17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 PABPC4Q13310 644 aaKnown RBP eCLIP17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 MTMR2Q13614 643 aa17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 LHX8Q68G74 356 aa17.6■□□□□ 0.41
SDCCAG3-211ENST00000486441 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
SDCCAG3-211ENST00000486441 SYN1P17600 705 aa17.59■□□□□ 0.41
SDCCAG3-211ENST00000486441 MAGEA10P43363 369 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms