RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 SLC9C2Q5TAH2 1124 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 ERO1AQ96HE7 468 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 PCDHB15Q9Y5E8 787 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 ZHX2Q9Y6X8 837 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 ATAD5Q96QE3 1844 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 CXCL11O14625 94 aa22.21■■□□□ 1.15
CLDN11-206ENST00000486429 USP5P45974 858 aa22.21■■□□□ 1.15
CLDN11-206ENST00000486429 PKN2Q16513 984 aaKnown RBP22.21■■□□□ 1.15
CLDN11-206ENST00000486429 EDC3Q96F86 508 aaKnown RBP22.21■■□□□ 1.15
CLDN11-206ENST00000486429 HAUS7Q99871 368 aa22.21■■□□□ 1.15
CLDN11-206ENST00000486429 TRIM34Q9BYJ4 488 aa22.21■■□□□ 1.15
CLDN11-206ENST00000486429 SAP30BPQ9UHR5 308 aaKnown RBP22.21■■□□□ 1.15
CLDN11-206ENST00000486429 HLA-DOAP06340 250 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 ANKRD23Q86SG2 305 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 CRACR2BQ8N4Y2 399 aaPredicted RBP22.2■■□□□ 1.14
CLDN11-206ENST00000486429 GPATCH3Q96I76 525 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 PALD1Q9ULE6 856 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 DDX60LQ5H9U9 1706 aaKnown RBP22.2■■□□□ 1.14
CLDN11-206ENST00000486429 PHIPQ8WWQ0 1821 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 NAV1Q8NEY1 1877 aa22.2■■□□□ 1.14
CLDN11-206ENST00000486429 MAGEB6P1A0A0J9YX57 407 aa22.19■■□□□ 1.14
CLDN11-206ENST00000486429 SP3Q02447 781 aa22.19■■□□□ 1.14
CLDN11-206ENST00000486429 RIOK1Q9BRS2 568 aaKnown RBP22.19■■□□□ 1.14
CLDN11-206ENST00000486429 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLDN11-206ENST00000486429 ECHDC1Q9NTX5 307 aa22.19■■□□□ 1.14
CLDN11-206ENST00000486429 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.19■■□□□ 1.14
CLDN11-206ENST00000486429 ZNF532Q9HCE3 1301 aa22.19■■□□□ 1.14
CLDN11-206ENST00000486429 PTPRFP10586 1907 aa22.18■■□□□ 1.14
CLDN11-206ENST00000486429 MYH1P12882 1939 aa22.18■■□□□ 1.14
CLDN11-206ENST00000486429 A0A0G2JLL6 359 aaPredicted RBP22.18■■□□□ 1.14
CLDN11-206ENST00000486429 PRRT2Q7Z6L0 340 aaPredicted RBP22.18■■□□□ 1.14
CLDN11-206ENST00000486429 CD99L2Q8TCZ2 262 aa22.18■■□□□ 1.14
CLDN11-206ENST00000486429 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
CLDN11-206ENST00000486429 PDHXO00330 501 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 TLR2O60603 784 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 CAP2P40123 477 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 MOGSQ13724 837 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 SLC4A8Q2Y0W8 1093 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 FBXO46Q6PJ61 603 aaPredicted RBP22.17■■□□□ 1.14
CLDN11-206ENST00000486429 CCDC84Q86UT8 332 aaPredicted RBP22.17■■□□□ 1.14
CLDN11-206ENST00000486429 FOXP4Q8IVH2 680 aaPredicted RBP22.17■■□□□ 1.14
CLDN11-206ENST00000486429 DNAJC18Q9H819 358 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 TRIM17Q9Y577 477 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 MYH7P12883 1935 aa22.17■■□□□ 1.14
CLDN11-206ENST00000486429 TCRBV5S4A2TA0A5A2 114 aa22.16■■□□□ 1.14
CLDN11-206ENST00000486429 TRIM75PA6NK02 468 aa22.16■■□□□ 1.14
CLDN11-206ENST00000486429 FASTKD5Q7L8L6 764 aaKnown RBP22.16■■□□□ 1.14
CLDN11-206ENST00000486429 METTL16Q86W50 562 aaKnown RBP22.16■■□□□ 1.14
CLDN11-206ENST00000486429 CRNKL1Q9BZJ0 848 aaKnown RBP22.16■■□□□ 1.14
CLDN11-206ENST00000486429 HPS5Q9UPZ3 1129 aa22.16■■□□□ 1.14
CLDN11-206ENST00000486429 ADD2P35612 726 aa22.15■■□□□ 1.14
CLDN11-206ENST00000486429 RRP1BQ14684 758 aaKnown RBP22.15■■□□□ 1.14
CLDN11-206ENST00000486429 GADL1Q6ZQY3 521 aa22.15■■□□□ 1.14
CLDN11-206ENST00000486429 OTOP1Q7RTM1 612 aa22.15■■□□□ 1.14
CLDN11-206ENST00000486429 PARK7Q99497 189 aaKnown RBP22.15■■□□□ 1.14
CLDN11-206ENST00000486429 TBC1D2Q9BYX2 928 aa22.15■■□□□ 1.14
CLDN11-206ENST00000486429 TTC6Q86TZ1 520 aa22.14■■□□□ 1.13
CLDN11-206ENST00000486429 LCORLQ8N3X6 602 aa22.14■■□□□ 1.13
CLDN11-206ENST00000486429 LOC285556D6RIA3 1793 aa22.14■■□□□ 1.13
CLDN11-206ENST00000486429 USP17L5A8MUK1 530 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 ASNSP08243 561 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 ZSCAN25Q6NSZ9 544 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 GPAT2Q6NUI2 795 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 ZNF280CQ8ND82 737 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 EHD4Q9H223 541 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 EFCC1Q9HA90 598 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 AS3MTQ9HBK9 375 aa22.13■■□□□ 1.13
CLDN11-206ENST00000486429 ADGRA2Q96PE1 1338 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 MBD4O95243 580 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 GDF11O95390 407 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 AAMPQ13685 434 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 ARHGEF6Q15052 776 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 UBE3CQ15386 1083 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 TSHZ3Q63HK5 1081 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 ARMT1Q9H993 441 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 GINM1Q9NU53 330 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 SERPINB13Q9UIV8 391 aa22.12■■□□□ 1.13
CLDN11-206ENST00000486429 SPP2Q13103 211 aa22.11■■□□□ 1.13
CLDN11-206ENST00000486429 CPA4Q9UI42 421 aa22.11■■□□□ 1.13
CLDN11-206ENST00000486429 ZBTB21Q9ULJ3 1066 aa22.11■■□□□ 1.13
CLDN11-206ENST00000486429 AGTPBP1Q9UPW5 1226 aa22.11■■□□□ 1.13
CLDN11-206ENST00000486429 SLC45A1Q9Y2W3 748 aa22.11■■□□□ 1.13
CLDN11-206ENST00000486429 TTC41PQ6P2S7 1318 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 HDAC1Q13547 482 aaPredicted RBP22.1■■□□□ 1.13
CLDN11-206ENST00000486429 KIF22Q14807 665 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 SLFNL1Q499Z3 407 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 C17orf99Q6UX52 265 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 SDR42E1Q8WUS8 393 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 MCM9Q9NXL9 1143 aa22.1■■□□□ 1.13
CLDN11-206ENST00000486429 ZBTB47Q9UFB7 747 aaPredicted RBP22.1■■□□□ 1.13
CLDN11-206ENST00000486429 ZSWIM8A7E2V4 1837 aa22.09■■□□□ 1.13
CLDN11-206ENST00000486429 POLR3DP05423 398 aaPredicted RBP22.09■■□□□ 1.13
CLDN11-206ENST00000486429 CYP2C8P10632 490 aa22.09■■□□□ 1.13
CLDN11-206ENST00000486429 LACTBP83111 547 aaPredicted RBP22.09■■□□□ 1.13
CLDN11-206ENST00000486429 CAP1Q01518 475 aa22.09■■□□□ 1.13
CLDN11-206ENST00000486429 KBTBD3Q8NAB2 608 aa22.09■■□□□ 1.13
CLDN11-206ENST00000486429 PROCA1Q8NCQ7 364 aaPredicted RBP22.09■■□□□ 1.13
CLDN11-206ENST00000486429 WDR18Q9BV38 432 aa22.09■■□□□ 1.13
CLDN11-206ENST00000486429 ERC2O15083 957 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 CHGBP05060 677 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms