RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CRKP46108 304 aa17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 VEGFBP49765 207 aa17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 TRDNQ13061 729 aa17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 RALYLQ86SE5 291 aaKnown RBP17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 C2orf69Q8N8R5 385 aa17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 GBA2Q9HCG7 927 aaPredicted RBP17.21■□□□□ 0.34
POLR2J3-204ENST00000486319 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 GSG1L2A8MUP6 293 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 PTMSP20962 102 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 MCM5P33992 734 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 HDLBPQ00341 1268 aaKnown RBP17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 PRAMEF18Q5VWM3 479 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 MIGA1Q8NAN2 632 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 TEKT1Q969V4 418 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
POLR2J3-204ENST00000486319 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 MECOMQ03112 1051 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 BRF1Q92994 677 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 CHMP4CQ96CF2 233 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 DEFB129Q9H1M3 183 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-204ENST00000486319 BAZ2AQ9UIF9 1905 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 ECE1P42892 770 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 TDO2P48775 406 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 HUNKP57058 714 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 GRM1Q13255 1194 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 PKP1Q13835 747 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 HHIPL1Q96JK4 782 aa17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 RIOK1Q9BRS2 568 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 TDRD3Q9H7E2 651 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-204ENST00000486319 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 BRD1O95696 1058 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 CYP4F22Q6NT55 531 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 DZIP1Q86YF9 867 aaKnown RBP17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 CAPNS2Q96L46 248 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
POLR2J3-204ENST00000486319 PRKAB2O43741 272 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 GJB2P29033 226 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 PRDX5P30044 214 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 NF2P35240 595 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 GSTO1P78417 241 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 GIMAP6Q6P9H5 292 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 ZNF384Q8TF68 577 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 GTF3C6Q969F1 213 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 ZDHHC15Q96MV8 337 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 ZNF70Q9UC06 446 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 LAMB1P07942 1786 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 PRC1O43663 620 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 TNFAIP1Q13829 316 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 TBC1D10CQ8IV04 446 aa17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 ZNF274Q96GC6 653 aaPredicted RBP17.16■□□□□ 0.34
POLR2J3-204ENST00000486319 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 PFKFB2O60825 505 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 LDHCP07864 332 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 EVCP57679 992 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 FKBP1BP68106 108 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 PPP2R3BQ9Y5P8 575 aa17.15■□□□□ 0.34
POLR2J3-204ENST00000486319 PDCP20941 246 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 STK3Q13188 491 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 RASA3Q14644 834 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 CHST3Q7LGC8 479 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 CERS3Q8IU89 383 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 STAG1Q8WVM7 1258 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 CRNKL1Q9BZJ0 848 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 KRT23Q9C075 422 aa17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-204ENST00000486319 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 STX6O43752 255 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 SYT1P21579 422 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 RGMBQ6NW40 437 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 TMOD2Q9NZR1 351 aa17.13■□□□□ 0.33
POLR2J3-204ENST00000486319 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms