RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 ZSCAN10Q96SZ4 725 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 RNF26Q9BY78 433 aaPredicted RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 NUP62CLQ9H1M0 184 aa13.92□□□□□ -0.18
PKP4-213ENST00000486254 RBM28Q9NW13 759 aaKnown RBP13.92□□□□□ -0.18
PKP4-213ENST00000486254 GAKO14976 1311 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 TNKSO95271 1327 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 USP17L21D6R901 530 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 PPEF1O14829 653 aaPredicted RBP13.91□□□□□ -0.18
PKP4-213ENST00000486254 CTAGE5O15320 804 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 CAVIN2O95810 425 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 APBA3O96018 575 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 U2AF2P26368 475 aaKnown RBP eCLIP13.91□□□□□ -0.18
PKP4-213ENST00000486254 HS1BP3Q53T59 392 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 COL23A1Q86Y22 540 aaPredicted RBP13.91□□□□□ -0.18
PKP4-213ENST00000486254 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 USP28Q96RU2 1077 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 NOL10Q9BSC4 688 aaKnown RBP13.91□□□□□ -0.18
PKP4-213ENST00000486254 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 COA1Q9GZY4 146 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 SENP2Q9HC62 589 aa13.91□□□□□ -0.18
PKP4-213ENST00000486254 AATFQ9NY61 560 aaKnown RBP eCLIP13.91□□□□□ -0.18
PKP4-213ENST00000486254 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
PKP4-213ENST00000486254 MORC2Q9Y6X9 1032 aaPredicted RBP13.91□□□□□ -0.18
PKP4-213ENST00000486254 MYH6P13533 1939 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 RANBP6O60518 1105 aaKnown RBP13.9□□□□□ -0.18
PKP4-213ENST00000486254 DTNBO60941 627 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 DEXIO95424 95 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
PKP4-213ENST00000486254 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 ENAHQ8N8S7 591 aaPredicted RBP13.9□□□□□ -0.18
PKP4-213ENST00000486254 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 TOMM22Q9NS69 142 aa13.9□□□□□ -0.18
PKP4-213ENST00000486254 EP400Q96L91 3159 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 GPR75-ASB3A0A0A6YYF3 556 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 CCDC192P0DO97 292 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 TRIM29Q14134 588 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
PKP4-213ENST00000486254 C12orf60Q5U649 245 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 NBPF11Q86T75 865 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
PKP4-213ENST00000486254 RTFDC1Q9BY42 306 aaPredicted RBP13.89□□□□□ -0.19
PKP4-213ENST00000486254 LIG1P18858 919 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 KRT40Q6A162 431 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 ADALQ6DHV7 355 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 CATIPQ7Z7H3 387 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
PKP4-213ENST00000486254 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
PKP4-213ENST00000486254 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 TCP11L1Q9NUJ3 509 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 POLLQ9UGP5 575 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 PARP3Q9Y6F1 533 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 FAM160A1Q05DH4 1040 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 TROAPQ12815 778 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 IFIT1BQ5T764 474 aaKnown RBP13.88□□□□□ -0.19
PKP4-213ENST00000486254 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 FOXP1Q9H334 677 aaPredicted RBP13.88□□□□□ -0.19
PKP4-213ENST00000486254 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
PKP4-213ENST00000486254 FUT2Q10981 343 aa13.87□□□□□ -0.19
PKP4-213ENST00000486254 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
PKP4-213ENST00000486254 CCDC73Q6ZRK6 1079 aa13.87□□□□□ -0.19
PKP4-213ENST00000486254 JMYQ8N9B5 988 aa13.87□□□□□ -0.19
PKP4-213ENST00000486254 TNMDQ9H2S6 317 aa13.87□□□□□ -0.19
PKP4-213ENST00000486254 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
PKP4-213ENST00000486254 PPP6R2O75170 966 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 MMP1P03956 469 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 MMP10P09238 476 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 XBP1P17861 261 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 RXRAP19793 462 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 FKBP1AP62942 108 aaKnown RBP13.86□□□□□ -0.19
PKP4-213ENST00000486254 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
PKP4-213ENST00000486254 MFSD14BQ5SR56 506 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 ENGASEQ8NFI3 743 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 PHKBQ93100 1093 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 SLC26A6Q9BXS9 759 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.86□□□□□ -0.19
PKP4-213ENST00000486254 MCM9Q9NXL9 1143 aa13.86□□□□□ -0.19
PKP4-213ENST00000486254 FAM237AA0A1B0GTK4 181 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 SPTLC2O15270 562 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 USP5P45974 858 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 SLC39A14Q15043 492 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 STK38Q15208 465 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 MPNDQ8N594 471 aa13.85□□□□□ -0.19
PKP4-213ENST00000486254 MRPS27Q92552 414 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms