RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 MAST3O60307 1309 aa12.34□□□□□ -0.43
SND1-213ENST00000486037 DDTLA6NHG4 134 aaPredicted RBP12.33□□□□□ -0.44
SND1-213ENST00000486037 RTP1P59025 263 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
SND1-213ENST00000486037 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 BEND3Q5T5X7 828 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 WWC1Q8IX03 1113 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 KAZALD1Q96I82 304 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
SND1-213ENST00000486037 USP40Q9NVE5 1235 aa12.33□□□□□ -0.44
SND1-213ENST00000486037 NCOR1O75376 2440 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 PRDX5P30044 214 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 RGS3P49796 1198 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 MAP3K10Q02779 954 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 BADQ92934 168 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
SND1-213ENST00000486037 TXNRD2Q9NNW7 524 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 SUGT1Q9Y2Z0 365 aa12.32□□□□□ -0.44
SND1-213ENST00000486037 CHD9Q3L8U1 2897 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 FAM196BA6NMK8 535 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 GCLCP48506 637 aaPredicted RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 HMGCS2P54868 508 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 SH3RF1Q7Z6J0 888 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 ADAMTS19Q8TE59 1207 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 USP6NLQ92738 828 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 MORF4L1Q9UBU8 362 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
SND1-213ENST00000486037 LRRFIP2Q9Y608 721 aaKnown RBP12.31□□□□□ -0.44
SND1-213ENST00000486037 CTNND1O60716 968 aaKnown RBP12.3□□□□□ -0.44
SND1-213ENST00000486037 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
SND1-213ENST00000486037 XRCC5P13010 732 aaKnown RBP12.3□□□□□ -0.44
SND1-213ENST00000486037 EPHB4P54760 987 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 SPP2Q13103 211 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 RRP1BQ14684 758 aaKnown RBP12.3□□□□□ -0.44
SND1-213ENST00000486037 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 NECAB3Q96P71 396 aaPredicted RBP12.3□□□□□ -0.44
SND1-213ENST00000486037 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 ATP11BQ9Y2G3 1177 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 CHD7Q9P2D1 2997 aa12.3□□□□□ -0.44
SND1-213ENST00000486037 RLFQ13129 1914 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 TRIM43BA6NCK2 446 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 GRM8O00222 908 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 ITGB8P26012 769 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 Q3C1V9 767 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 METTL24Q5JXM2 366 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 WDR63Q8IWG1 891 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 TRMT2AQ8IZ69 625 aaKnown RBP12.29□□□□□ -0.44
SND1-213ENST00000486037 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 TRIM43Q96BQ3 446 aaPredicted RBP12.29□□□□□ -0.44
SND1-213ENST00000486037 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
SND1-213ENST00000486037 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 PORCNQ9H237 461 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 PRDM5Q9NQX1 630 aaPredicted RBP12.29□□□□□ -0.44
SND1-213ENST00000486037 MYH13Q9UKX3 1938 aa12.29□□□□□ -0.44
SND1-213ENST00000486037 PDE8BO95263 885 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 FGFR2P21802 821 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
SND1-213ENST00000486037 MORN1Q5T089 497 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 ZSCAN29Q8IWY8 852 aaPredicted RBP12.28□□□□□ -0.44
SND1-213ENST00000486037 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 P2RX7Q99572 595 aaKnown RBP12.28□□□□□ -0.44
SND1-213ENST00000486037 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 PRKAG2Q9UGJ0 569 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
SND1-213ENST00000486037 ENTPD3O75355 529 aa12.27□□□□□ -0.45
SND1-213ENST00000486037 PDE3AQ14432 1141 aa12.27□□□□□ -0.45
SND1-213ENST00000486037 TRIM60Q495X7 471 aa12.27□□□□□ -0.45
SND1-213ENST00000486037 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
SND1-213ENST00000486037 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
SND1-213ENST00000486037 ATAD5Q96QE3 1844 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 E9PSI1 815 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 DNAJB2P25686 324 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 PICALMQ13492 652 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 GJC2Q5T442 439 aaPredicted RBP12.26□□□□□ -0.45
SND1-213ENST00000486037 GPR142Q7Z601 462 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 ZNF280CQ8ND82 737 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 WDR66Q8TBY9 1149 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
SND1-213ENST00000486037 APBA2Q99767 749 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 RBPJLQ9UBG7 517 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
SND1-213ENST00000486037 NDUFB9Q9Y6M9 179 aa12.26□□□□□ -0.45
SND1-213ENST00000486037 TCF20Q9UGU0 1960 aaKnown RBP12.26□□□□□ -0.45
SND1-213ENST00000486037 MYH2Q9UKX2 1941 aa12.25□□□□□ -0.45
SND1-213ENST00000486037 NBPF7P0C2Y1 421 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms