RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
GCFC2-209ENST00000486016 IFI16Q16666 785 aaKnown RBP7.77□□□□□ -1.17
GCFC2-209ENST00000486016 ZBTB37Q5TC79 503 aa7.77□□□□□ -1.17
GCFC2-209ENST00000486016 MBNL3Q9NUK0 354 aaKnown RBP7.77□□□□□ -1.17
GCFC2-209ENST00000486016 ADAMTS6Q9UKP5 1117 aa7.77□□□□□ -1.17
GCFC2-209ENST00000486016 CSADQ9Y600 493 aa7.77□□□□□ -1.17
GCFC2-209ENST00000486016 DCDC2CA8MYV0 355 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 FANCGO15287 622 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 CELA3AP09093 270 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 PTPN11Q06124 597 aaPredicted RBP7.76□□□□□ -1.17
GCFC2-209ENST00000486016 LLGL2Q6P1M3 1020 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 ACSBG1Q96GR2 724 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 C12orf49Q9H741 205 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 SAMM50Q9Y512 469 aa7.76□□□□□ -1.17
GCFC2-209ENST00000486016 IGF2BP3O00425 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
GCFC2-209ENST00000486016 RNASE1P07998 156 aaKnown RBP7.75□□□□□ -1.17
GCFC2-209ENST00000486016 KSR1Q8IVT5 923 aa7.75□□□□□ -1.17
GCFC2-209ENST00000486016 SSU72Q9NP77 194 aaKnown RBP7.75□□□□□ -1.17
GCFC2-209ENST00000486016 PRDM10Q9NQV6 1147 aa7.75□□□□□ -1.17
GCFC2-209ENST00000486016 FAM8A1Q9UBU6 413 aa7.75□□□□□ -1.17
GCFC2-209ENST00000486016 CYP8B1Q9UNU6 501 aa7.75□□□□□ -1.17
GCFC2-209ENST00000486016 TMEM265A0A087WTH1 108 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 LRRC14Q15048 493 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 AOC3Q16853 763 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 KRTAP19-4Q3LI73 84 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 SPG7Q9UQ90 795 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 SNX11Q9Y5W9 270 aa7.74□□□□□ -1.17
GCFC2-209ENST00000486016 EOMESO95936 686 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 USP17L7P0C7H9 530 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 ZNF865P0CJ78 1059 aaPredicted RBP7.73□□□□□ -1.17
GCFC2-209ENST00000486016 INPP5AQ14642 412 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 PCNX4Q63HM2 1172 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 ATG4DQ86TL0 474 aaPredicted RBP7.73□□□□□ -1.17
GCFC2-209ENST00000486016 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 GAL3ST3Q96A11 431 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 PCDHA4Q9UN74 947 aa7.73□□□□□ -1.17
GCFC2-209ENST00000486016 NKPD1Q17RQ9 610 aa7.72□□□□□ -1.17
GCFC2-209ENST00000486016 LRFN4Q6PJG9 635 aa7.72□□□□□ -1.17
GCFC2-209ENST00000486016 FAM168AQ92567 244 aa7.72□□□□□ -1.17
GCFC2-209ENST00000486016 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
GCFC2-209ENST00000486016 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
GCFC2-209ENST00000486016 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
GCFC2-209ENST00000486016 SV2BQ7L1I2 683 aa7.71□□□□□ -1.18
GCFC2-209ENST00000486016 TMEM40Q8WWA1 233 aa7.71□□□□□ -1.18
GCFC2-209ENST00000486016 FRMD6Q96NE9 622 aa7.71□□□□□ -1.18
GCFC2-209ENST00000486016 SLC38A3Q99624 504 aa7.71□□□□□ -1.18
GCFC2-209ENST00000486016 ITIH2P19823 946 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 SLBPQ14493 270 aaKnown RBP eCLIP7.7□□□□□ -1.18
GCFC2-209ENST00000486016 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.7□□□□□ -1.18
GCFC2-209ENST00000486016 ARMCX6Q7L4S7 300 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 LRRN4CLQ8ND94 238 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 FBRSQ9HAH7 460 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 RC3H2Q9HBD1 1191 aaKnown RBP7.7□□□□□ -1.18
GCFC2-209ENST00000486016 GTF2IRD1Q9UHL9 959 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 CNTNAP4Q9C0A0 1308 aa7.7□□□□□ -1.18
GCFC2-209ENST00000486016 LRIG2O94898 1065 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 GNA15P30679 374 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 CAP2P40123 477 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 KCT2Q8NC54 265 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 PI4K2BQ8TCG2 481 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 PLPPR2Q96GM1 343 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 RNF19AQ9NV58 838 aa7.69□□□□□ -1.18
GCFC2-209ENST00000486016 SLITRK5O94991 958 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 CDK8P49336 464 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 LCE5AQ5TCM9 118 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 SLC23A3Q6PIS1 610 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 ARHGAP27Q6ZUM4 889 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 WNT10AQ9GZT5 417 aa7.68□□□□□ -1.18
GCFC2-209ENST00000486016 NKG7Q16617 165 aa7.67□□□□□ -1.18
GCFC2-209ENST00000486016 ANGEL2Q5VTE6 544 aaKnown RBP7.67□□□□□ -1.18
GCFC2-209ENST00000486016 CDC37L1Q7L3B6 337 aa7.67□□□□□ -1.18
GCFC2-209ENST00000486016 BHLHE22Q8NFJ8 381 aaPredicted RBP7.67□□□□□ -1.18
GCFC2-209ENST00000486016 ELMO3Q96BJ8 720 aa7.67□□□□□ -1.18
GCFC2-209ENST00000486016 AK5Q9Y6K8 562 aa7.67□□□□□ -1.18
GCFC2-209ENST00000486016 PITPNM2Q9BZ72 1349 aa7.67□□□□□ -1.18
GCFC2-209ENST00000486016 GFRA2O00451 464 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 PRPF40AO75400 957 aaKnown RBP7.66□□□□□ -1.18
GCFC2-209ENST00000486016 TTBK2Q6IQ55 1244 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 C22orf34Q6ZV56 151 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 PICK1Q9NRD5 415 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 TTF2Q9UNY4 1162 aaKnown RBP7.66□□□□□ -1.18
GCFC2-209ENST00000486016 MAPK8IP1Q9UQF2 711 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
GCFC2-209ENST00000486016 PRR33A8MZF0 331 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 RBAK-RBAKDNI3L0D1 243 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 EIF4BP23588 611 aaKnown RBP7.65□□□□□ -1.18
GCFC2-209ENST00000486016 CLCN7P51798 805 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 RPS26P62854 115 aaKnown RBP7.65□□□□□ -1.18
GCFC2-209ENST00000486016 HDXQ7Z353 690 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 ASB11Q8WXH4 323 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 FAM84AQ96KN4 292 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 PRDM7Q9NQW5 492 aa7.65□□□□□ -1.18
GCFC2-209ENST00000486016 PRDM5Q9NQX1 630 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms