RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
SRGAP3-207ENST00000485983 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 USH1GQ495M9 461 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 SRGAP1Q7Z6B7 1085 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 LPIN2Q92539 896 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 TBC1D32Q96NH3 1257 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 TIMM10P62072 90 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 RUFY3Q7L099 469 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 RTEL1Q9NZ71 1219 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 TACC3Q9Y6A5 838 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 PPP2R5DQ14738 602 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 SEC62Q99442 399 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
SRGAP3-207ENST00000485983 ELP1O95163 1332 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 HSPA1LP34931 641 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 CPLX4Q7Z7G2 160 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 UBL4BQ8N7F7 174 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 APPBP2Q92624 585 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 XAGE2Q96GT9 111 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 NPATQ14207 1427 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 EXOC3O60645 756 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 ZNF569Q5MCW4 686 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 LRWD1Q9UFC0 647 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 TEKT1Q969V4 418 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 IGHDP01880 384 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 AK2P54819 239 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 HERC4Q5GLZ8 1057 aaPredicted RBP11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 PRIMPOLQ96LW4 560 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 A2MP01023 1474 aa11.78□□□□□ -0.52
SRGAP3-207ENST00000485983 ACTN4O43707 911 aaKnown RBP11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 ASIC2Q16515 512 aa11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 DEPTORQ8TB45 409 aa11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 USP40Q9NVE5 1235 aa11.77□□□□□ -0.52
SRGAP3-207ENST00000485983 TUBBP07437 444 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 CEP85Q6P2H3 762 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 SAMD15Q9P1V8 674 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 PRKAG2Q9UGJ0 569 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 KIF21AQ7Z4S6 1674 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 PRDM1O75626 825 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 MAPKAPK5Q8IW41 473 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 OATP04181 439 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 YARSP54577 528 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 TYRO3Q06418 890 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 IWS1Q96ST2 819 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 TTLL3Q9Y4R7 772 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
SRGAP3-207ENST00000485983 KARSQ15046 597 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 GADL1Q6ZQY3 521 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 ZBTB8OSQ8IWT0 167 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 CCDC89Q8N998 374 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 CCDC94Q9BW85 323 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 IVLP07476 585 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 BCRP11274 1271 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 TRIM14Q14142 442 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 IPO4Q8TEX9 1081 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 DCTPP1Q9H773 170 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 CTNND2Q9UQB3 1225 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 TAF5LO75529 589 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 KIF11P52732 1056 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 GTF2IP78347 998 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 MYL5Q02045 173 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 LGSNQ5TDP6 509 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 TGFBRAP1Q8WUH2 860 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 UBLCP1Q8WVY7 318 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 ABL1P00519 1130 aa11.76□□□□□ -0.53
SRGAP3-207ENST00000485983 SLC12A2P55011 1212 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms