RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 OSBPP22059 807 aa21.01■□□□□ 0.95
SMC4-216ENST00000485645 AATFQ9NY61 560 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMC4-216ENST00000485645 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.01■□□□□ 0.95
SMC4-216ENST00000485645 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
SMC4-216ENST00000485645 IGSF3O75054 1194 aa21■□□□□ 0.95
SMC4-216ENST00000485645 CCDC84Q86UT8 332 aaPredicted RBP21■□□□□ 0.95
SMC4-216ENST00000485645 RAET1EQ8TD07 263 aa21■□□□□ 0.95
SMC4-216ENST00000485645 PTPRFP10586 1907 aa21■□□□□ 0.95
SMC4-216ENST00000485645 ZAP70P43403 619 aa20.99■□□□□ 0.95
SMC4-216ENST00000485645 FCGRTP55899 365 aa20.99■□□□□ 0.95
SMC4-216ENST00000485645 PPP4CP60510 307 aa20.99■□□□□ 0.95
SMC4-216ENST00000485645 CCDC8Q9H0W5 538 aaPredicted RBP20.99■□□□□ 0.95
SMC4-216ENST00000485645 DHX36Q9H2U1 1008 aaKnown RBP20.99■□□□□ 0.95
SMC4-216ENST00000485645 HERC5Q9UII4 1024 aaKnown RBP20.99■□□□□ 0.95
SMC4-216ENST00000485645 DBNLQ9UJU6 430 aaKnown RBP20.99■□□□□ 0.95
SMC4-216ENST00000485645 MYPNQ86TC9 1320 aa20.99■□□□□ 0.95
SMC4-216ENST00000485645 CAP2P40123 477 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 SMCR8Q8TEV9 937 aaPredicted RBP20.98■□□□□ 0.95
SMC4-216ENST00000485645 TGFBRAP1Q8WUH2 860 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 EAF2Q96CJ1 260 aaPredicted RBP20.98■□□□□ 0.95
SMC4-216ENST00000485645 TBC1D2Q9BYX2 928 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 AGTPBP1Q9UPW5 1226 aa20.98■□□□□ 0.95
SMC4-216ENST00000485645 GRK4P32298 578 aa20.97■□□□□ 0.95
SMC4-216ENST00000485645 ADGRA1Q86SQ6 560 aa20.97■□□□□ 0.95
SMC4-216ENST00000485645 ZNF280CQ8ND82 737 aa20.97■□□□□ 0.95
SMC4-216ENST00000485645 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
SMC4-216ENST00000485645 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
SMC4-216ENST00000485645 MAST2Q6P0Q8 1798 aa20.97■□□□□ 0.95
SMC4-216ENST00000485645 SPP2Q13103 211 aa20.96■□□□□ 0.95
SMC4-216ENST00000485645 ERC1Q8IUD2 1116 aa20.96■□□□□ 0.95
SMC4-216ENST00000485645 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
SMC4-216ENST00000485645 PROCA1Q8NCQ7 364 aaPredicted RBP20.96■□□□□ 0.95
SMC4-216ENST00000485645 PIH1D3Q9NQM4 214 aaKnown RBP20.96■□□□□ 0.95
SMC4-216ENST00000485645 PNMA3Q9UL41 463 aa20.96■□□□□ 0.95
SMC4-216ENST00000485645 MGAMO43451 1857 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 MYO5AQ9Y4I1 1855 aaKnown RBP20.95■□□□□ 0.94
SMC4-216ENST00000485645 USP17L5A8MUK1 530 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 MS4A1P11836 297 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 PRKCZQ05513 592 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 RRP1BQ14684 758 aaKnown RBP20.95■□□□□ 0.94
SMC4-216ENST00000485645 TREML2Q5T2D2 321 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 AS3MTQ9HBK9 375 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 FLT1P17948 1338 aa20.95■□□□□ 0.94
SMC4-216ENST00000485645 MTFR1Q15390 333 aa20.94■□□□□ 0.94
SMC4-216ENST00000485645 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
SMC4-216ENST00000485645 GCC1Q96CN9 775 aa20.94■□□□□ 0.94
SMC4-216ENST00000485645 TRIM34Q9BYJ4 488 aa20.94■□□□□ 0.94
SMC4-216ENST00000485645 BIN2Q9UBW5 565 aaPredicted RBP20.94■□□□□ 0.94
SMC4-216ENST00000485645 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
SMC4-216ENST00000485645 ATAD5Q96QE3 1844 aa20.94■□□□□ 0.94
SMC4-216ENST00000485645 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
SMC4-216ENST00000485645 CYP7A1P22680 504 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 HMGCS2P54868 508 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 UBXN2AP68543 259 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 PABPC4Q13310 644 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMC4-216ENST00000485645 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 CRACR2BQ8N4Y2 399 aaPredicted RBP20.93■□□□□ 0.94
SMC4-216ENST00000485645 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 GABRQQ9UN88 632 aa20.93■□□□□ 0.94
SMC4-216ENST00000485645 TNPO2O14787 897 aaKnown RBP20.92■□□□□ 0.94
SMC4-216ENST00000485645 ASNSP08243 561 aa20.92■□□□□ 0.94
SMC4-216ENST00000485645 DYNLL1P63167 89 aaKnown RBP20.92■□□□□ 0.94
SMC4-216ENST00000485645 AACSQ86V21 672 aa20.92■□□□□ 0.94
SMC4-216ENST00000485645 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
SMC4-216ENST00000485645 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
SMC4-216ENST00000485645 SLAIN1Q8ND83 568 aa20.92■□□□□ 0.94
SMC4-216ENST00000485645 SIPA1L1O43166 1804 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 HLA-DOAP06340 250 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 SH3D19Q5HYK7 790 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 CERS3Q8IU89 383 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 CDK5RAP2Q96SN8 1893 aa20.91■□□□□ 0.94
SMC4-216ENST00000485645 FOCADQ5VW36 1801 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 ADCY3O60266 1144 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 CCL5P13501 91 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 GCLCP48506 637 aaPredicted RBP20.9■□□□□ 0.94
SMC4-216ENST00000485645 FLT3LGP49771 235 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 FAM110CQ1W6H9 321 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 MAGEB6Q8N7X4 407 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 WDR18Q9BV38 432 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 DNAJC18Q9H819 358 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 GINM1Q9NU53 330 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 SAP30BPQ9UHR5 308 aaKnown RBP20.9■□□□□ 0.94
SMC4-216ENST00000485645 NDUFB9Q9Y6M9 179 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
SMC4-216ENST00000485645 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
SMC4-216ENST00000485645 MIGA1Q8NAN2 632 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 RHPN1Q8TCX5 695 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 COA7Q96BR5 231 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 RNF208Q9H0X6 261 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 ASCC2Q9H1I8 757 aaPredicted RBP20.89■□□□□ 0.93
SMC4-216ENST00000485645 ANTXR1Q9H6X2 564 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 IL1RAPL2Q9NP60 686 aa20.89■□□□□ 0.93
SMC4-216ENST00000485645 GDF11O95390 407 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 GJB1P08034 283 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 USP5P45974 858 aa20.88■□□□□ 0.93
SMC4-216ENST00000485645 BACE1P56817 501 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms