RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 MICAL2O94851 1124 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 NASPP49321 788 aaPredicted RBP7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 SERINC3Q13530 473 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 CC2D1BQ5T0F9 858 aaKnown RBP7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 NXPE4Q6UWF7 544 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 IFT57Q9NWB7 429 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 SIRPGQ9P1W8 387 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 MRVI1Q9Y6F6 885 aa7.24□□□□□ -1.25
NHLRC3-205ENST00000485407 ENPP3O14638 875 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 HSPA1AP0DMV8 641 aaKnown RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 HSPA1BP0DMV9 641 aaKnown RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 IL2RBP14784 551 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 TNNT2P45379 298 aaPredicted RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 CHMP4BP1P59074 171 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 CENPCQ03188 943 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 DDX10Q13206 875 aaKnown RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 RALBP1Q15311 655 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 ANKS3Q6ZW76 656 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 ZNF438Q7Z4V0 828 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 SNX29Q8TEQ0 813 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 KLF16Q9BXK1 252 aaPredicted RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 BCO2Q9BYV7 579 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 SRCIN1Q9C0H9 1055 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 EFR3BQ9Y2G0 817 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 R3HCC1Q9Y3T6 440 aaKnown RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 PPME1Q9Y570 386 aa7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 PARP4Q9UKK3 1724 aaKnown RBP7.23□□□□□ -1.25
NHLRC3-205ENST00000485407 PEAK1Q9H792 1746 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 BCL9O00512 1426 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 NCAPD2Q15021 1401 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 EXOC5O00471 708 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 DNAJC6O75061 913 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 PHACTR2O75167 634 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 TIMP2P16035 220 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 GTF2E1P29083 439 aaPredicted RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 MTHFSP49914 203 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 HTRA3P83110 453 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 DDB1Q16531 1140 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 C1orf53Q5VUE5 145 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 NLGN2Q8NFZ4 835 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 RNPC3Q96LT9 517 aaKnown RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 NLRP3Q96P20 1036 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 NIFKQ9BYG3 293 aaKnown RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 SLKQ9H2G2 1235 aaPredicted RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 SPC25Q9HBM1 224 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 ZFYVE28Q9HCC9 887 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 TTF2Q9UNY4 1162 aaKnown RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 FNDC3AQ9Y2H6 1198 aaKnown RBP7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
NHLRC3-205ENST00000485407 KAT6BQ8WYB5 2073 aa7.21□□□□□ -1.25
NHLRC3-205ENST00000485407 CCDC85CA6NKD9 419 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 MINDY4BA8MYZ0 360 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 MEN1O00255 615 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 TERTO14746 1132 aaKnown RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 POLR3DP05423 398 aaPredicted RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 ETFBP38117 255 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 WDR4P57081 412 aaKnown RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 NR5A1Q13285 461 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 EIF4A2Q14240 407 aaKnown RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 CCDC181Q5TID7 509 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 TMEM214Q6NUQ4 689 aaKnown RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 CPLX3Q8WVH0 158 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 LTV1Q96GA3 475 aaPredicted RBP7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 NPHS2Q9NP85 383 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 BCS1LQ9Y276 419 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 WNK3Q9BYP7 1800 aa7.21□□□□□ -1.26
NHLRC3-205ENST00000485407 F6X3S4 739 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 NR3C2P08235 984 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 GBP2P32456 591 aaPredicted RBP7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 IL13P35225 146 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 MLLT1Q03111 559 aaPredicted RBP7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 CLN3Q13286 438 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 PWP1Q13610 501 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 LCE2CQ5TA81 110 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 MRPL14Q6P1L8 145 aaKnown RBP7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 RAPGEF4Q8WZA2 1011 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 CFAP53Q96M91 514 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 ZFP42Q96MM3 310 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 DEPDC7Q96QD5 511 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 NOC4LQ9BVI4 516 aaKnown RBP7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 ADAMTS1Q9UHI8 967 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 IGSF1Q8N6C5 1336 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 RGPD2P0DJD1 1756 aa7.2□□□□□ -1.26
NHLRC3-205ENST00000485407 OVOS2A0A0G2JMS6 1433 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 ADH1AP07327 375 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 TATP17735 454 aaPredicted RBP7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 POLD1P28340 1107 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 PPP2R1AP30153 589 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 GSTT1P30711 240 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 TXLNAP40222 546 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 HIF1AQ16665 826 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 TXNRD1Q16881 649 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 HNRNPLLQ8WVV9 542 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms