RNA–Protein interactions for RNA: ENST00000485149.1

SORT1-206, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 442 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-206ENST00000485149 LRP10Q7Z4F1 713 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 PODNQ7Z5L7 613 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 NPAS4Q8IUM7 802 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 DEFB123Q8N688 67 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 SH3TC2Q8TF17 1288 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 SHISA4Q96DD7 197 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 DNAJC2Q99543 621 aaKnown RBP7.91□□□□□ -1.14
SORT1-206ENST00000485149 GGA1Q9UJY5 639 aa7.91□□□□□ -1.14
SORT1-206ENST00000485149 ZNF646O15015 1829 aaPredicted RBP7.91□□□□□ -1.14
SORT1-206ENST00000485149 DLG5Q8TDM6 1919 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 COL4A1P02462 1669 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 MYO3BQ8WXR4 1341 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 ACTN4O43707 911 aaKnown RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 PPP1R12BO60237 982 aaPredicted RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 PEX14O75381 377 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 GNRH1P01148 92 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 PTMSP20962 102 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 ERCC5P28715 1186 aaPredicted RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 MARSP56192 900 aaKnown RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 RPS8P62241 208 aaKnown RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 MDM2Q00987 491 aaPredicted RBP7.9□□□□□ -1.14
SORT1-206ENST00000485149 UBE2Q1Q7Z7E8 422 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.9□□□□□ -1.14
SORT1-206ENST00000485149 CLMNQ96JQ2 1002 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 PHOX2BQ99453 314 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 PTPN18Q99952 460 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 LNPKQ9C0E8 428 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 GPCPD1Q9NPB8 672 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 ANKIB1Q9P2G1 1089 aa7.9□□□□□ -1.14
SORT1-206ENST00000485149 ANKRD33BA6NCL7 494 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 SASH1O94885 1247 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 EIF2S2P20042 333 aaKnown RBP7.89□□□□□ -1.15
SORT1-206ENST00000485149 GJA8P48165 433 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 PRMT2P55345 433 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 IGBP1P78318 339 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 KIF22Q14807 665 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 KRT24Q2M2I5 525 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 TJAP1Q5JTD0 557 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 TSPYL4Q9UJ04 414 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 FZD1Q9UP38 647 aa7.89□□□□□ -1.15
SORT1-206ENST00000485149 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
SORT1-206ENST00000485149 IREB2P48200 963 aaKnown RBP7.88□□□□□ -1.15
SORT1-206ENST00000485149 TAF1CQ15572 869 aaPredicted RBP7.88□□□□□ -1.15
SORT1-206ENST00000485149 DACT2Q5SW24 774 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 COPS6Q7L5N1 327 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 APBB1IPQ7Z5R6 666 aaPredicted RBP7.88□□□□□ -1.15
SORT1-206ENST00000485149 DEFB129Q9H1M3 183 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 RAPGEFL1Q9UHV5 662 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 PPP2R3BQ9Y5P8 575 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 SSC5DA1L4H1 1573 aa7.88□□□□□ -1.15
SORT1-206ENST00000485149 XDHP47989 1333 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 SOWAHDA6NJG2 315 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 CHL1O00533 1208 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 WDHD1O75717 1129 aaPredicted RBP7.87□□□□□ -1.15
SORT1-206ENST00000485149 RGS20O76081 388 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 ANXA1P04083 346 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 GJB1P08034 283 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 CFHP08603 1231 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 ATP2B4P23634 1241 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 BMP8BP34820 402 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 GJA5P36382 358 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 LACTBP83111 547 aaPredicted RBP7.87□□□□□ -1.15
SORT1-206ENST00000485149 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
SORT1-206ENST00000485149 MTFR1Q15390 333 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 PROSER3Q2NL68 480 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 TSNAXIP1Q2TAA8 658 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 SUPT20HL1Q3ZLR7 823 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 DIEXFQ68CQ4 756 aaKnown RBP7.87□□□□□ -1.15
SORT1-206ENST00000485149 PHLDB3Q6NSJ2 640 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 Q7L0L9 218 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 FAM89AQ96GI7 184 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 MTMR10Q9NXD2 777 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 STAP2Q9UGK3 403 aa7.87□□□□□ -1.15
SORT1-206ENST00000485149 MED23Q9ULK4 1368 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 FARP2O94887 1054 aaPredicted RBP7.86□□□□□ -1.15
SORT1-206ENST00000485149 PARNO95453 639 aaKnown RBP7.86□□□□□ -1.15
SORT1-206ENST00000485149 TAGLNQ01995 201 aaKnown RBP7.86□□□□□ -1.15
SORT1-206ENST00000485149 LMOD3Q0VAK6 560 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 PTPROQ16827 1216 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 LRIT3Q3SXY7 679 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 STRIP1Q5VSL9 837 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 EGFLAMQ63HQ2 1017 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 SDE2Q6IQ49 451 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 XAGE3Q8WTP9 111 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 SGSM3Q96HU1 749 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 ZBED3Q96IU2 234 aaPredicted RBP7.86□□□□□ -1.15
SORT1-206ENST00000485149 MTRQ99707 1265 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 MXD3Q9BW11 206 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 TANGO6Q9C0B7 1094 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 ARHGAP39Q9C0H5 1083 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
SORT1-206ENST00000485149 PCDHB3Q9Y5E6 796 aa7.86□□□□□ -1.15
SORT1-206ENST00000485149 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
SORT1-206ENST00000485149 TLR2O60603 784 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms