RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
DDR1-246ENST00000485023 SCYL3Q8IZE3 742 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 TRIM34Q9BYJ4 488 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 DHX36Q9H2U1 1008 aaKnown RBP19.6■□□□□ 0.73
DDR1-246ENST00000485023 SAGE1Q9NXZ1 904 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 PI4KBQ9UBF8 816 aa19.6■□□□□ 0.73
DDR1-246ENST00000485023 NAV1Q8NEY1 1877 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 CCL15-CCL14A0A0B4J2E2 113 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 PRKAB2O43741 272 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 TBC1D8O95759 1140 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 HLA-DOAP06340 250 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 MAP3K10Q02779 954 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 PPIL2Q13356 520 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 UBE3CQ15386 1083 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 CCL15Q16663 113 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 NOL9Q5SY16 702 aaKnown RBP19.59■□□□□ 0.73
DDR1-246ENST00000485023 CHD1LQ86WJ1 897 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 IFNL1Q8IU54 200 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 FSD1Q9BTV5 496 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 PICK1Q9NRD5 415 aa19.59■□□□□ 0.73
DDR1-246ENST00000485023 GTF2A2P52657 109 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 PDE1AP54750 535 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 RRP1BQ14684 758 aaKnown RBP19.58■□□□□ 0.72
DDR1-246ENST00000485023 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 MS4A4AQ96JQ5 239 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 PUS7LQ9H0K6 701 aaKnown RBP19.58■□□□□ 0.72
DDR1-246ENST00000485023 DNAJC18Q9H819 358 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 MYH7P12883 1935 aa19.58■□□□□ 0.72
DDR1-246ENST00000485023 DDX60LQ5H9U9 1706 aaKnown RBP19.57■□□□□ 0.72
DDR1-246ENST00000485023 DOCK1Q14185 1865 aa19.57■□□□□ 0.72
DDR1-246ENST00000485023 TBC1D12O60347 775 aa19.57■□□□□ 0.72
DDR1-246ENST00000485023 NUCB1Q02818 461 aa19.57■□□□□ 0.72
DDR1-246ENST00000485023 PPATQ06203 517 aa19.57■□□□□ 0.72
DDR1-246ENST00000485023 PTPN18Q99952 460 aa19.57■□□□□ 0.72
DDR1-246ENST00000485023 HERC5Q9UII4 1024 aaKnown RBP19.57■□□□□ 0.72
DDR1-246ENST00000485023 RNF113AO15541 343 aaKnown RBP19.56■□□□□ 0.72
DDR1-246ENST00000485023 CTNND1O60716 968 aaKnown RBP19.56■□□□□ 0.72
DDR1-246ENST00000485023 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
DDR1-246ENST00000485023 INHBEP58166 350 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 EVX2Q03828 476 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 SNAPC2Q13487 334 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 MCM9Q9NXL9 1143 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 STAP2Q9UGK3 403 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 LAMB1P07942 1786 aa19.56■□□□□ 0.72
DDR1-246ENST00000485023 GDF11O95390 407 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 CYP2D6P10635 497 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 PTPRAP18433 802 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 SHROOM1Q2M3G4 852 aaPredicted RBP19.55■□□□□ 0.72
DDR1-246ENST00000485023 R3HDMLQ9H3Y0 253 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 DCP1AQ9NPI6 582 aaPredicted RBP19.55■□□□□ 0.72
DDR1-246ENST00000485023 SLC4A4Q9Y6R1 1079 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 MYH1P12882 1939 aa19.55■□□□□ 0.72
DDR1-246ENST00000485023 TESPA1A2RU30 521 aaPredicted RBP19.54■□□□□ 0.72
DDR1-246ENST00000485023 M0R2C6 588 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 CETPP11597 493 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 PLCD1P51178 756 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
DDR1-246ENST00000485023 FAM43AQ8N2R8 423 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 APPBP2Q92624 585 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
DDR1-246ENST00000485023 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 ALDH1A1P00352 501 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 ZFYP08048 801 aaPredicted RBP19.53■□□□□ 0.72
DDR1-246ENST00000485023 CAP2P40123 477 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 JAG1P78504 1218 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 OTUD7BQ6GQQ9 843 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 TTC6Q86TZ1 520 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 SEC62Q99442 399 aaKnown RBP19.53■□□□□ 0.72
DDR1-246ENST00000485023 SERPINB13Q9UIV8 391 aa19.53■□□□□ 0.72
DDR1-246ENST00000485023 CYP2D7A0A087X1C5 515 aa19.52■□□□□ 0.72
DDR1-246ENST00000485023 CRHR2Q13324 411 aa19.52■□□□□ 0.72
DDR1-246ENST00000485023 LRRFIP1Q32MZ4 808 aaKnown RBP19.52■□□□□ 0.72
DDR1-246ENST00000485023 KCNH4Q9UQ05 1017 aa19.52■□□□□ 0.72
DDR1-246ENST00000485023 ATAD5Q96QE3 1844 aa19.52■□□□□ 0.72
DDR1-246ENST00000485023 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 GPAA1O43292 621 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 METTL16Q86W50 562 aaKnown RBP19.51■□□□□ 0.71
DDR1-246ENST00000485023 PLEKHM2Q8IWE5 1019 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 EVI5LQ96CN4 794 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 STRBPQ96SI9 672 aaKnown RBP19.51■□□□□ 0.71
DDR1-246ENST00000485023 EHD4Q9H223 541 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 ATP8A2Q9NTI2 1148 aa19.51■□□□□ 0.71
DDR1-246ENST00000485023 SMIM22K7EJ46 135 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 GPR25O00155 361 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 TAF1CQ15572 869 aaPredicted RBP19.5■□□□□ 0.71
DDR1-246ENST00000485023 GADL1Q6ZQY3 521 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 ZNF296Q8WUU4 475 aaPredicted RBP19.5■□□□□ 0.71
DDR1-246ENST00000485023 RILPL2Q969X0 211 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 ZBTB21Q9ULJ3 1066 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 AFG3L2Q9Y4W6 797 aa19.5■□□□□ 0.71
DDR1-246ENST00000485023 USP17L12C9JPN9 530 aa19.49■□□□□ 0.71
DDR1-246ENST00000485023 USP17L21D6R901 530 aa19.49■□□□□ 0.71
DDR1-246ENST00000485023 PDE4AP27815 886 aa19.49■□□□□ 0.71
DDR1-246ENST00000485023 SPP2Q13103 211 aa19.49■□□□□ 0.71
DDR1-246ENST00000485023 DGKZQ13574 1117 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms