RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 MAPKAPK5Q8IW41 473 aa21.67■■□□□ 1.06
RNF38-207ENST00000484621 GPATCH3Q96I76 525 aa21.67■■□□□ 1.06
RNF38-207ENST00000484621 HAUS7Q99871 368 aa21.67■■□□□ 1.06
RNF38-207ENST00000484621 COL2A1P02458 1487 aaPredicted RBP21.66■■□□□ 1.06
RNF38-207ENST00000484621 TRIOBPQ9H2D6 2365 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 H0YGN5 161 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 CERS3Q8IU89 383 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 ERO1AQ96HE7 468 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 ZNF333Q96JL9 665 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 ECHDC1Q9NTX5 307 aa21.66■■□□□ 1.06
RNF38-207ENST00000484621 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
RNF38-207ENST00000484621 DOCK1Q14185 1865 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 FLT1P17948 1338 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 CCL15-CCL14A0A0B4J2E2 113 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 PHF20L1A8MW92 1017 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 SLURP2P0DP57 97 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 PDE6AP16499 860 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 PPIL2Q13356 520 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 AAMPQ13685 434 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 CCL15Q16663 113 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 NOL9Q5SY16 702 aaKnown RBP21.65■■□□□ 1.06
RNF38-207ENST00000484621 MS4A4AQ96JQ5 239 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 EFCC1Q9HA90 598 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.65■■□□□ 1.06
RNF38-207ENST00000484621 PICK1Q9NRD5 415 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 ZBTB47Q9UFB7 747 aaPredicted RBP21.65■■□□□ 1.06
RNF38-207ENST00000484621 PTCH2Q9Y6C5 1203 aa21.65■■□□□ 1.06
RNF38-207ENST00000484621 IRF6O14896 467 aa21.64■■□□□ 1.05
RNF38-207ENST00000484621 USP5P45974 858 aa21.64■■□□□ 1.05
RNF38-207ENST00000484621 MAP3K10Q02779 954 aa21.64■■□□□ 1.05
RNF38-207ENST00000484621 PPATQ06203 517 aa21.64■■□□□ 1.05
RNF38-207ENST00000484621 DHX36Q9H2U1 1008 aaKnown RBP21.64■■□□□ 1.05
RNF38-207ENST00000484621 ZNF532Q9HCE3 1301 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 MAGEB6P1A0A0J9YX57 407 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 TESPA1A2RU30 521 aaPredicted RBP21.63■■□□□ 1.05
RNF38-207ENST00000484621 FAM196BA6NMK8 535 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 TBC1D12O60347 775 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 SNAPC2Q13487 334 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 SCYL3Q8IZE3 742 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 BRI3BPQ8WY22 251 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.63■■□□□ 1.05
RNF38-207ENST00000484621 SAP30BPQ9UHR5 308 aaKnown RBP21.63■■□□□ 1.05
RNF38-207ENST00000484621 ATAD5Q96QE3 1844 aa21.63■■□□□ 1.05
RNF38-207ENST00000484621 SIPA1L1O43166 1804 aa21.62■■□□□ 1.05
RNF38-207ENST00000484621 CTNND1O60716 968 aaKnown RBP21.62■■□□□ 1.05
RNF38-207ENST00000484621 CETPP11597 493 aa21.62■■□□□ 1.05
RNF38-207ENST00000484621 EXOC6Q8TAG9 804 aa21.62■■□□□ 1.05
RNF38-207ENST00000484621 PI4KBQ9UBF8 816 aa21.62■■□□□ 1.05
RNF38-207ENST00000484621 PALD1Q9ULE6 856 aa21.62■■□□□ 1.05
RNF38-207ENST00000484621 SP3Q02447 781 aa21.61■■□□□ 1.05
RNF38-207ENST00000484621 HDAC1Q13547 482 aaPredicted RBP21.61■■□□□ 1.05
RNF38-207ENST00000484621 TSHZ3Q63HK5 1081 aa21.61■■□□□ 1.05
RNF38-207ENST00000484621 TRIM34Q9BYJ4 488 aa21.61■■□□□ 1.05
RNF38-207ENST00000484621 HERC5Q9UII4 1024 aaKnown RBP21.61■■□□□ 1.05
RNF38-207ENST00000484621 NAV1Q8NEY1 1877 aa21.6■■□□□ 1.05
RNF38-207ENST00000484621 HLA-DOAP06340 250 aa21.6■■□□□ 1.05
RNF38-207ENST00000484621 SLC4A8Q2Y0W8 1093 aa21.6■■□□□ 1.05
RNF38-207ENST00000484621 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
RNF38-207ENST00000484621 CHRDL2Q6WN34 429 aa21.6■■□□□ 1.05
RNF38-207ENST00000484621 CRACR2BQ8N4Y2 399 aaPredicted RBP21.6■■□□□ 1.05
RNF38-207ENST00000484621 RIOK1Q9BRS2 568 aaKnown RBP21.6■■□□□ 1.05
RNF38-207ENST00000484621 TCRBV5S4A2TA0A5A2 114 aa21.59■■□□□ 1.05
RNF38-207ENST00000484621 PTPRAP18433 802 aa21.59■■□□□ 1.05
RNF38-207ENST00000484621 ADD2P35612 726 aa21.59■■□□□ 1.05
RNF38-207ENST00000484621 CRNKL1Q9BZJ0 848 aaKnown RBP21.59■■□□□ 1.05
RNF38-207ENST00000484621 ARHGAP39Q9C0H5 1083 aa21.59■■□□□ 1.05
RNF38-207ENST00000484621 PHIPQ8WWQ0 1821 aa21.59■■□□□ 1.05
RNF38-207ENST00000484621 TAF1CQ15572 869 aaPredicted RBP21.58■■□□□ 1.05
RNF38-207ENST00000484621 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 FOXP4Q8IVH2 680 aaPredicted RBP21.58■■□□□ 1.05
RNF38-207ENST00000484621 FAM43AQ8N2R8 423 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 SH3TC2Q8TF17 1288 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 RWDD1Q9H446 243 aaPredicted RBP21.58■■□□□ 1.05
RNF38-207ENST00000484621 KCNH4Q9UQ05 1017 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 ZHX2Q9Y6X8 837 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 CEP290O15078 2479 aa21.58■■□□□ 1.05
RNF38-207ENST00000484621 TTC41PQ6P2S7 1318 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 PTPRFP10586 1907 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 ERC2O15083 957 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 SLFNL1Q499Z3 407 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 TMEM106CQ9BVX2 250 aa21.57■■□□□ 1.04
RNF38-207ENST00000484621 RBM27Q9P2N5 1060 aaKnown RBP21.57■■□□□ 1.04
RNF38-207ENST00000484621 BTBD19C9JJ37 291 aa21.56■■□□□ 1.04
RNF38-207ENST00000484621 LCORLQ8N3X6 602 aa21.56■■□□□ 1.04
RNF38-207ENST00000484621 OTUD7AQ8TE49 926 aaPredicted RBP21.56■■□□□ 1.04
RNF38-207ENST00000484621 ZFYVE28Q9HCC9 887 aa21.56■■□□□ 1.04
RNF38-207ENST00000484621 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.56■■□□□ 1.04
RNF38-207ENST00000484621 BAZ2AQ9UIF9 1905 aaKnown RBP21.55■■□□□ 1.04
RNF38-207ENST00000484621 CXCL11O14625 94 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 ECM2O94769 699 aaPredicted RBP21.55■■□□□ 1.04
RNF38-207ENST00000484621 MBD4O95243 580 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 MX1P20591 662 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 CAP2P40123 477 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 UBE3CQ15386 1083 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 SLC9C1Q4G0N8 1177 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 ARMT1Q9H993 441 aa21.55■■□□□ 1.04
RNF38-207ENST00000484621 GLRX3O76003 335 aaKnown RBP21.54■■□□□ 1.04
RNF38-207ENST00000484621 POLR3DP05423 398 aaPredicted RBP21.54■■□□□ 1.04
RNF38-207ENST00000484621 TTC6Q86TZ1 520 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms