RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
ITGA4-210ENST00000484404 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
ITGA4-210ENST00000484404 ZNF512BQ96KM6 892 aaPredicted RBP16.77■□□□□ 0.28
ITGA4-210ENST00000484404 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
ITGA4-210ENST00000484404 PTPN22Q9Y2R2 807 aa16.77■□□□□ 0.28
ITGA4-210ENST00000484404 TLR2O60603 784 aa16.76■□□□□ 0.27
ITGA4-210ENST00000484404 HMMRO75330 724 aa16.76■□□□□ 0.27
ITGA4-210ENST00000484404 BAG3O95817 575 aa16.76■□□□□ 0.27
ITGA4-210ENST00000484404 CYP2C8P10632 490 aa16.76■□□□□ 0.27
ITGA4-210ENST00000484404 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
ITGA4-210ENST00000484404 ANKRD23Q86SG2 305 aa16.76■□□□□ 0.27
ITGA4-210ENST00000484404 RPAP2Q8IXW5 612 aaPredicted RBP16.76■□□□□ 0.27
ITGA4-210ENST00000484404 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
ITGA4-210ENST00000484404 CTNND1O60716 968 aaKnown RBP16.75■□□□□ 0.27
ITGA4-210ENST00000484404 MYCP01106 439 aaPredicted RBP16.75■□□□□ 0.27
ITGA4-210ENST00000484404 MAP3K10Q02779 954 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 GPAT2Q6NUI2 795 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
ITGA4-210ENST00000484404 PALD1Q9ULE6 856 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 AFG3L2Q9Y4W6 797 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
ITGA4-210ENST00000484404 A0A0G2JLL6 359 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-210ENST00000484404 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-210ENST00000484404 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
ITGA4-210ENST00000484404 PLCG2P16885 1265 aa16.74■□□□□ 0.27
ITGA4-210ENST00000484404 PRRT2Q7Z6L0 340 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-210ENST00000484404 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
ITGA4-210ENST00000484404 KIF1BPQ96EK5 621 aa16.74■□□□□ 0.27
ITGA4-210ENST00000484404 DOCK3Q8IZD9 2030 aa16.74■□□□□ 0.27
ITGA4-210ENST00000484404 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 GOLIM4O00461 696 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 CXCL11O14625 94 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
ITGA4-210ENST00000484404 GDF11O95390 407 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-210ENST00000484404 CTGFP29279 349 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 PPP4CP60510 307 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-210ENST00000484404 CRACR2BQ8N4Y2 399 aaPredicted RBP16.73■□□□□ 0.27
ITGA4-210ENST00000484404 DNAJC18Q9H819 358 aa16.73■□□□□ 0.27
ITGA4-210ENST00000484404 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
ITGA4-210ENST00000484404 TBC1D12O60347 775 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 USP5P45974 858 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 JAG1P78504 1218 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 MAP3K12Q12852 859 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 KIF22Q14807 665 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 TREML2Q5T2D2 321 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 PARK7Q99497 189 aaKnown RBP16.72■□□□□ 0.27
ITGA4-210ENST00000484404 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
ITGA4-210ENST00000484404 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 CAP2P40123 477 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 HMGCS2P54868 508 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 SPP2Q13103 211 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 PDE3AQ14432 1141 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 SLFNL1Q499Z3 407 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
ITGA4-210ENST00000484404 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 PDE6AP16499 860 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 PSMC4P43686 418 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 SLC9C1Q4G0N8 1177 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
ITGA4-210ENST00000484404 SH3TC2Q8TF17 1288 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 TRIM47Q96LD4 638 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 BOLA2Q9H3K6 86 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
ITGA4-210ENST00000484404 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
ITGA4-210ENST00000484404 PDE4DIPQ5VU43 2346 aa16.7■□□□□ 0.26
ITGA4-210ENST00000484404 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
ITGA4-210ENST00000484404 FMNL1O95466 1100 aaPredicted RBP16.69■□□□□ 0.26
ITGA4-210ENST00000484404 CHGBP05060 677 aa16.69■□□□□ 0.26
ITGA4-210ENST00000484404 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
ITGA4-210ENST00000484404 SLC9C2Q5TAH2 1124 aa16.69■□□□□ 0.26
ITGA4-210ENST00000484404 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
ITGA4-210ENST00000484404 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
ITGA4-210ENST00000484404 MAGEB6P1A0A0J9YX57 407 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 OSBPP22059 807 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 EVX2Q03828 476 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 MTMR2Q13614 643 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 TTF1Q15361 905 aaPredicted RBP16.68■□□□□ 0.26
ITGA4-210ENST00000484404 ZNF280CQ8ND82 737 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
ITGA4-210ENST00000484404 AGTPBP1Q9UPW5 1226 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 PLXNB2O15031 1838 aa16.68■□□□□ 0.26
ITGA4-210ENST00000484404 BRCA2P51587 3418 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 BCRP11274 1271 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 LCORLQ8N3X6 602 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 ARMC5Q96C12 935 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
ITGA4-210ENST00000484404 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 MYPNQ86TC9 1320 aa16.67■□□□□ 0.26
ITGA4-210ENST00000484404 TSHZ3Q63HK5 1081 aa16.66■□□□□ 0.26
ITGA4-210ENST00000484404 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
ITGA4-210ENST00000484404 SDR42E1Q8WUS8 393 aa16.66■□□□□ 0.26
ITGA4-210ENST00000484404 ZNF333Q96JL9 665 aa16.66■□□□□ 0.26
ITGA4-210ENST00000484404 ARMT1Q9H993 441 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms