RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 MIGA1Q8NAN2 632 aa23.48■■□□□ 1.35
NDUFA3-213ENST00000484103 ARMC5Q96C12 935 aa23.48■■□□□ 1.35
NDUFA3-213ENST00000484103 TRIM47Q96LD4 638 aa23.48■■□□□ 1.35
NDUFA3-213ENST00000484103 MAP3K10Q02779 954 aa23.47■■□□□ 1.35
NDUFA3-213ENST00000484103 RRP1BQ14684 758 aaKnown RBP23.47■■□□□ 1.35
NDUFA3-213ENST00000484103 ZNF333Q96JL9 665 aa23.47■■□□□ 1.35
NDUFA3-213ENST00000484103 ANTXR1Q9H6X2 564 aa23.47■■□□□ 1.35
NDUFA3-213ENST00000484103 ADGRA2Q96PE1 1338 aa23.47■■□□□ 1.35
NDUFA3-213ENST00000484103 BRCA2P51587 3418 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 FLT1P17948 1338 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 NBPF11Q86T75 865 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 MAGEB6Q8N7X4 407 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 TMEM106CQ9BVX2 250 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 TRIM34Q9BYJ4 488 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 PALD1Q9ULE6 856 aa23.46■■□□□ 1.35
NDUFA3-213ENST00000484103 OSBPP22059 807 aa23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 SPP2Q13103 211 aa23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 TREML2Q5T2D2 321 aa23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 ERC1Q8IUD2 1116 aa23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 CRACR2BQ8N4Y2 399 aaPredicted RBP23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 SMCR8Q8TEV9 937 aaPredicted RBP23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 PHIPQ8WWQ0 1821 aa23.45■■□□□ 1.34
NDUFA3-213ENST00000484103 TBC1D12O60347 775 aa23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 NPM3O75607 178 aaKnown RBP23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 MAP4K4O95819 1239 aaPredicted RBP23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 PLCG2P16885 1265 aa23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 SHROOM1Q2M3G4 852 aaPredicted RBP23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 RAET1EQ8TD07 263 aa23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 ZNF512BQ96KM6 892 aaPredicted RBP23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 RCAN3Q9UKA8 241 aa23.44■■□□□ 1.34
NDUFA3-213ENST00000484103 ATAD5Q96QE3 1844 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 MYPNQ86TC9 1320 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 GDF11O95390 407 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 MS4A1P11836 297 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 HMGCS2P54868 508 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 RHPN1Q8TCX5 695 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 PI4KBQ9UBF8 816 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 SRRDQ9UH36 339 aa23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 COL2A1P02458 1487 aaPredicted RBP23.43■■□□□ 1.34
NDUFA3-213ENST00000484103 MKI67P46013 3256 aaKnown RBP23.42■■□□□ 1.34
NDUFA3-213ENST00000484103 CAP2P40123 477 aa23.42■■□□□ 1.34
NDUFA3-213ENST00000484103 PTPRFP10586 1907 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 CDK5RAP2Q96SN8 1893 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 SIPA1L1O43166 1804 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 BCRP11274 1271 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 USP5P45974 858 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 FCGRTP55899 365 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 PPP4CP60510 307 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 PRKCZQ05513 592 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 C20orf194Q5TEA3 1177 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 ANKRD13CQ8N6S4 541 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 ZNF280CQ8ND82 737 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 DNAJC2Q99543 621 aaKnown RBP23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 BIN2Q9UBW5 565 aaPredicted RBP23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 HERC5Q9UII4 1024 aaKnown RBP23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 TAOK2Q9UL54 1235 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 DDX19BQ9UMR2 479 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 AGTPBP1Q9UPW5 1226 aa23.41■■□□□ 1.34
NDUFA3-213ENST00000484103 HOXD10P28358 340 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 JAG1P78504 1218 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 MTFR1Q15390 333 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 HSP90AB4PQ58FF6 505 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 PRPF38BQ5VTL8 546 aaKnown RBP23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 SIRT2Q8IXJ6 389 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 DHX36Q9H2U1 1008 aaKnown RBP23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 DNAJC18Q9H819 358 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 GABRQQ9UN88 632 aa23.4■■□□□ 1.34
NDUFA3-213ENST00000484103 USP17L5A8MUK1 530 aa23.39■■□□□ 1.33
NDUFA3-213ENST00000484103 GNRH1P01148 92 aa23.39■■□□□ 1.33
NDUFA3-213ENST00000484103 HLA-DOAP06340 250 aa23.39■■□□□ 1.33
NDUFA3-213ENST00000484103 IFIT2P09913 472 aaKnown RBP23.39■■□□□ 1.33
NDUFA3-213ENST00000484103 MTMR2Q13614 643 aa23.39■■□□□ 1.33
NDUFA3-213ENST00000484103 PDE4DIPQ5VU43 2346 aa23.38■■□□□ 1.33
NDUFA3-213ENST00000484103 HMMRO75330 724 aa23.38■■□□□ 1.33
NDUFA3-213ENST00000484103 MAP3K12Q12852 859 aa23.38■■□□□ 1.33
NDUFA3-213ENST00000484103 CLASRPQ8N2M8 674 aaKnown RBP23.38■■□□□ 1.33
NDUFA3-213ENST00000484103 ZBTB40Q9NUA8 1239 aa23.38■■□□□ 1.33
NDUFA3-213ENST00000484103 RBBP6Q7Z6E9 1792 aaKnown RBP23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 GOLIM4O00461 696 aa23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 TNPO2O14787 897 aaKnown RBP23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 GRK4P32298 578 aa23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 PRMT2P55345 433 aa23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 EDC3Q96F86 508 aaKnown RBP23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 AS3MTQ9HBK9 375 aa23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 FOCADQ5VW36 1801 aa23.37■■□□□ 1.33
NDUFA3-213ENST00000484103 RPAP2Q8IXW5 612 aaPredicted RBP23.36■■□□□ 1.33
NDUFA3-213ENST00000484103 KIF1BPQ96EK5 621 aa23.36■■□□□ 1.33
NDUFA3-213ENST00000484103 PNMA3Q9UL41 463 aa23.36■■□□□ 1.33
NDUFA3-213ENST00000484103 SLC45A1Q9Y2W3 748 aa23.36■■□□□ 1.33
NDUFA3-213ENST00000484103 MGAMO43451 1857 aa23.35■■□□□ 1.33
NDUFA3-213ENST00000484103 PROCA1Q8NCQ7 364 aaPredicted RBP23.35■■□□□ 1.33
NDUFA3-213ENST00000484103 PEX10O60683 326 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 ELNP15502 786 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 ZYXQ15942 572 aaKnown RBP23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 SLC9C2Q5TAH2 1124 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 FOXP4Q8IVH2 680 aaPredicted RBP23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 ASCC2Q9H1I8 757 aaPredicted RBP23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 TMOD4Q9NZQ9 345 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 ZBTB21Q9ULJ3 1066 aa23.34■■□□□ 1.33
NDUFA3-213ENST00000484103 KIAA0100Q14667 2235 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms